RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Gtf3c3Q3TMP1 882 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Stn1Q8K2X3 378 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tut1Q8R3F9 869 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Slfn1Q9Z0I7 337 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ift172Q6VH22 1749 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Nap1l1P28656 391 aaKnown RBP9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tbc1d2bQ3U0J8 965 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Slc38a10Q5I012 1090 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Sumf1Q8R0F3 372 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 BrapQ99MP8 591 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Pnmal2G3X9N3 661 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Slx4ipQ9D7Y9 413 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ncaph2Q8BSP2 607 aa9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Nup88Q8CEC0 753 aaKnown RBP9.17□□□□□ -0.94
Lig3-201ENSMUST00000021039 Abcc4E9Q236 1325 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Cfap58B2RW38 873 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Myl3P09542 204 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 U2af1l4Q8BGJ9 220 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Osbpl5Q9ER64 874 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Myom1Q62234 1667 aaKnown RBP9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Cyp2c69E9PXC3 491 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Cyp2c40P56657 491 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Anp32eP97822 260 aaKnown RBP9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Crb1Q8VHS2 1405 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Magea1O89006 320 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Magea5O89009 320 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Gm5592Q3V0A6 857 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tmtc2Q56A06 836 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 DbnlQ62418 436 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Magea2Q9R2A2 320 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Prr16A3KMN5 304 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Rtn1Q8K0T0 780 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tceanc2Q8R2M0 207 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Myoz2Q9JJW5 264 aa9.16□□□□□ -0.94
Lig3-201ENSMUST00000021039 Gm10093D3YYI8 482 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Hdac1O09106 482 aaKnown RBP9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Kif3cO35066 796 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 IbspQ61711 324 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Pus7B7ZNL8 666 aaKnown RBP9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Vmn2r68L7N2B3 851 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Mx1P09922 631 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 EspnlQ3UYR4 1005 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Cpa2Q504N0 417 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tktl2Q9D4D4 627 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ltb4r2Q9JJL9 360 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ccdc173A0JLY1 547 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Ifi207E9Q3L4 978 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Zbtb21E9Q444 1094 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Cyp2c68K7N6C2 491 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Stxbp3Q60770 592 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Znf219Q6IQX8 726 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Tti2Q8BGV4 512 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Emilin1Q99K41 1017 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Med4Q9CQA5 270 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 TnmdQ9EP64 317 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Mlh1Q9JK91 760 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Foxo4Q9WVH3 505 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Fam186bD3Z420 943 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 PcQ05920 1178 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 GnptabQ69ZN6 1235 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Stx6Q9JKK1 255 aa9.15□□□□□ -0.94
Lig3-201ENSMUST00000021039 Pip4k2aO70172 405 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Ercc3P49135 783 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Tmed8Q3UHI4 326 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Eme2Q56A04 373 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Smarcc2Q6PDG5 1213 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Kdm4aQ8BW72 1064 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Cxcl11Q9JHH5 100 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 NktrP30415 1453 aa9.15□□□□□ -0.95
Lig3-201ENSMUST00000021039 Sept1P42209 366 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 IarsQ8BU30 1262 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Tango6Q8C3S2 1079 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Ccdc150Q8CDI7 1110 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Olr1Q9EQ09 363 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 AdnpQ9Z103 1108 aaKnown RBP9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Lamc2Q61092 1191 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 SowahdQ8BY98 327 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 9230110C19RikQ8CC70 267 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Sept14Q9DA97 430 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Unc13bQ9Z1N9 1602 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Nfat5Q9WV30 1534 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Cntnap1O54991 1385 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Atp8b3Q6UQ17 1335 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Gm29094F6Q785 221 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Rps6kb1Q8BSK8 525 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Kiaa1524Q8BWY9 907 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Tmem179Q8BHH9 233 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Rbm43Q99J64 343 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Znf704Q9ERQ3 566 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Cwc15Q9JHS9 229 aaKnown RBP9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Scn4aQ9ER60 1841 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Cyp3a57D3YYZ0 503 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Dnm1P39053 867 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Prpf38aQ4FK66 312 aaKnown RBP9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Ezh2Q61188 746 aaKnown RBP9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Sp4Q62445 782 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Ranbp6Q8BIV3 1105 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Ppp6r3Q922D4 844 aa9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Ppil4Q9CXG3 492 aaKnown RBP9.14□□□□□ -0.95
Lig3-201ENSMUST00000021039 Rufy3Q9D394 469 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms