RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Fam228aQ8CDW1 299 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Cnot6lQ8VEG6 555 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ccdc13D3YV10 709 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Mier3Q3UHF3 551 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Kdm1aQ6ZQ88 853 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ccdc113Q8C5T8 377 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Rab11fip4Q8BQP8 635 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 P3h4Q8K2B0 443 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 RestQ8VIG1 1082 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Slc12a5Q91V14 1138 aa13.67□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ice2Q3UZ18 988 aaKnown RBP13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Utp18Q5SSI6 552 aaKnown RBP13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 CtcfQ61164 736 aaKnown RBP13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Anks6Q6GQX6 883 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ak2Q9WTP6 239 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Slc38a10Q5I012 1090 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Rab3gap1Q80UJ7 981 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Zbtb43Q9DAI4 467 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ripk4Q9ERK0 786 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ppp1r15aP17564 657 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Chpf2Q3UU43 768 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ifit2Q64112 472 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Depdc1bQ8BH88 529 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Serpinb13Q8CDC0 389 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Znf287Q9EQB9 759 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Plcb1Q9Z1B3 1216 aa13.66□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Gm5934D3Z4U6 212 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Atp2b3Q0VF55 1220 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 NntQ61941 1086 aaKnown RBP13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Hook2Q7TMK6 716 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Tmem87bQ8BKU8 555 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Cyth1Q9QX11 398 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Stmn1P54227 149 aaKnown RBP13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 HdxQ14B70 692 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Cavin2Q63918 418 aaKnown RBP13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ccpg1Q640L3 753 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Fgd5Q80UZ0 1219 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Ppp2r2cQ8BG02 447 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Slc12a2P55012 1205 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 MlecQ6ZQI3 291 aaKnown RBP13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Prpf40bQ80W14 870 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Stkld1Q80YS9 662 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Stac3Q8BZ71 360 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Kif17Q99PW8 1038 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Bfsp1A2AMT1 669 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 MarcksP26645 309 aaKnown RBP13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Slc7a3P70423 618 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Cep104Q80V31 926 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Spata2Q8K004 515 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Sirt1Q923E4 737 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Taf7lQ9D3R9 471 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 CftrP26361 1476 aa13.65□□□□□ -0.22
Pcdhac1-201ENSMUST00000007584 Tbc1d5Q80XQ2 815 aa13.65□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Zscan22Q8BGS5 496 aa13.65□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Psmd2Q8VDM4 908 aa13.65□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Cul5Q9D5V5 780 aa13.65□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Pacsin2Q9WVE8 486 aaKnown RBP13.65□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Kcnh3Q9WVJ0 1095 aa13.65□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Prdm16A2A935 1275 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Sstr3P30935 428 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Kif5aP33175 1027 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Zap70P43404 618 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Kif2cQ922S8 721 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Gm2030D3Z7C4 212 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Kctd16Q5DTY9 427 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 SpopQ6ZWS8 374 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Uba5Q8VE47 403 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Smarcad1Q04692 1021 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 KynuQ9CXF0 464 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Ccdc124Q9D8X2 217 aaKnown RBP13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 AatfQ9JKX4 526 aaKnown RBP13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Serpinb6eI7HJI3 429 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Cct6aP80317 531 aaKnown RBP13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Nap1l4Q78ZA7 375 aaKnown RBP13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Cep85Q8BMK0 761 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Abhd8Q8R0P8 439 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Nrbp1Q99J45 535 aa13.64□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 TrdnE9Q9K5 693 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Eef1bO70251 225 aaKnown RBP13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Zfp202Q8C879 641 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Tcp11l1Q8BTG3 509 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Kdm2bQ6P1G2 1309 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Tuft1O08970 390 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 PpardP35396 440 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Map3k2Q61083 619 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Atp1a3Q6PIC6 1013 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 BrapQ99MP8 591 aa13.63□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Chmp6P0C0A3 200 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Ccdc28aQ8CEI3 192 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Zmym4A2A791 1549 aaKnown RBP13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Hcls1P49710 486 aaKnown RBP13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Cage1Q5IR70 849 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Krt25Q8VCW2 446 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Mlh1Q9JK91 760 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Rps6ka1P18653 724 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Atp8b2P98199 1209 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Esyt2Q3TZZ7 845 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 RbsnQ80Y56 783 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Ankrd49Q8VE42 238 aa13.62□□□□□ -0.23
Pcdhac1-201ENSMUST00000007584 Rapgef4Q9EQZ6 1011 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms