RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Mei4Q8BRM6 389 aa13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 ImmtQ8CAQ8 757 aaKnown RBP13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Otud6bQ8K2H2 294 aa13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ppp4r3bQ922R5 820 aa13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Larp6Q8BN59 492 aa13.15□□□□□ -0.31
Vps54-201ENSMUST00000006221 Nip7Q9CXK8 180 aaKnown RBP13.15□□□□□ -0.31
Vps54-201ENSMUST00000006221 Crb1Q8VHS2 1405 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Metap2O08663 478 aaKnown RBP13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Mctp2Q5RJH2 878 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pcdhb14Q6PB90 796 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ranbp6Q8BIV3 1105 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Srek1Q8BZX4 494 aaKnown RBP13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Wdr19Q3UGF1 1341 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cyp3a59D3Z2W7 503 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Prl2c1Q5SVL9 228 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Smim5Q8BT42 78 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Zbtb43Q9DAI4 467 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Golgb1E9PVZ8 3238 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pde6aP27664 859 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ift57Q8BXG3 429 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Dnaaf4Q8R368 420 aa13.14□□□□□ -0.31
Vps54-201ENSMUST00000006221 Bin2D3Z6Q9 489 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Zbtb38Q3LR78 1197 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pip4k2bQ80XI4 416 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Bola3Q8CEI1 110 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Eaf2Q91ZD6 262 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 CenpqQ9CPQ5 267 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 CpdO89001 1377 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cplx1P63040 134 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pla2g4fQ50L41 855 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Fam160b2Q80YR2 744 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ces1dQ8VCT4 565 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Dnajc14Q921R4 703 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Tomm22Q9CPQ3 142 aa13.13□□□□□ -0.31
Vps54-201ENSMUST00000006221 Naaladl2A0A0N4SUJ3 795 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cdc27A2A6Q5 825 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Atp8b5A3FIN4 1183 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Gm10134F6ZQC6 126 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Me1P06801 572 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Grin1P35438 938 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Dnajc2P54103 621 aaKnown RBP13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Taf3Q5HZG4 932 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Panx2Q6IMP4 677 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Alx1Q8C8B0 326 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 ApobrQ8VBT6 942 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Kri1Q8VDQ9 704 aaKnown RBP13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 IcoslgQ9JHJ8 322 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cops6O88545 324 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Atp8a2P98200 1148 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Haus7Q8BKT8 364 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Tmem87aQ8BXN9 555 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Lrrc59Q922Q8 307 aaKnown RBP13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Odf2lQ9D478 642 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Rgs12Q8CGE9 1381 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Rec8Q8C5S7 591 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Atp12aQ9Z1W8 1035 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Casz1Q9CWL2 1761 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Glis3Q6XP49 780 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Kcnq5Q9JK45 933 aa13.12□□□□□ -0.31
Vps54-201ENSMUST00000006221 Slfnl1Q8BHW9 410 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Rapgef3Q8VCC8 918 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pcdhb22Q91XZ8 794 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 4930548H24RikQ9D496 437 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Prpf4bQ61136 1007 aaKnown RBP13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pde4bB1AWC9 736 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Sept1P42209 366 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Sirt2Q8VDQ8 389 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Suclg2Q9Z2I8 433 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Myh1Q5SX40 1942 aa13.11□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cep120Q7TSG1 988 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 9230110C19RikQ8CC70 267 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Kcnj14Q8JZN3 434 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Mylk2Q8VCR8 613 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pde8bE9Q4S1 865 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ms4a1P19437 291 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cdc37Q61081 379 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pram1Q6BCL1 675 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Znf653Q6YND2 615 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ddx41Q91VN6 622 aaKnown RBP13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Filip1Q9CS72 1211 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Bcl9lQ67FY2 1494 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Phlpp1Q8CHE4 1687 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Plcb3P51432 1234 aaKnown RBP13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 NenfQ9CQ45 171 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ube3bQ9ES34 1070 aa13.1□□□□□ -0.31
Vps54-201ENSMUST00000006221 CtcfQ61164 736 aaKnown RBP13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Cyp7a1Q64505 503 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Zbtb1Q91VL9 713 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Etnk1Q9D4V0 363 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Pard3Q99NH2 1333 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Arl8aQ8VEH3 186 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Shank3Q4ACU6 1730 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ugt1a6bK9J7B2 531 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Prl3d1P18121 224 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 VeztQ3ZK22 780 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ugt1a6Q64435 531 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ugt1a7cQ6ZQM8 531 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Ctdspl2Q8BG15 465 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Krt24A1L317 512 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Diaph1O08808 1255 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms