RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Large1Q9Z1M7 756 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 CoblQ5NBX1 1337 aaKnown RBP19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Bin2D3Z6Q9 489 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Magi2Q9WVQ1 1275 aa19.05■□□□□ 0.64
Shh-201ENSMUST00000002708 Ssc5dQ8BV57 1371 aa19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Zbtb38Q3LR78 1197 aa19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Dnm3Q8BZ98 863 aa19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Cnot6lQ8VEG6 555 aa19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Mei1Q9D4I2 1268 aa19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Mei4Q8BRM6 389 aa19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 ImmtQ8CAQ8 757 aaKnown RBP19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Lrrc59Q922Q8 307 aaKnown RBP19.04■□□□□ 0.64
Shh-201ENSMUST00000002708 Ankrd31A0A140LI88 1765 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Greb1lB9EJV3 1913 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Cdca8Q8BHX3 289 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Fsd2Q8BZ52 692 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Cfap99A0A140LIX9 648 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Kcnh4A2A5F7 1018 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Prdm1Q60636 856 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Acap3Q6NXL5 833 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Slfnl1Q8BHW9 410 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Lrrc2Q8VDB8 371 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Sil1Q9EPK6 465 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Kcnq5Q9JK45 933 aa19.03■□□□□ 0.64
Shh-201ENSMUST00000002708 Odf2lQ9D478 642 aa19.02■□□□□ 0.64
Shh-201ENSMUST00000002708 Sh3bp1P55194 680 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Fam170aQ66LM6 333 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Pcdhb9E9Q5G2 828 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Zfp202Q8C879 641 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Col3a1P08121 1464 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Pde8bE9Q4S1 865 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Sptlc2P97363 560 aaKnown RBP19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 RbsnQ80Y56 783 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Acnat2Q8BGG9 420 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 Lmod1Q8BVA4 595 aa19.01■□□□□ 0.63
Shh-201ENSMUST00000002708 LtkP08923 888 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Sept1P42209 366 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Jmjd4Q8BFT6 427 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Ube3bQ9ES34 1070 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Zeb2Q9R0G7 1215 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Foxo4Q9WVH3 505 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Brwd3A2AHJ4 1799 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Lipo1J3QME6 396 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Trim34bJ3QNR8 485 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Gas2l3Q3UWW6 683 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Sik1Q60670 779 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Naa16Q9DBB4 864 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Zkscan5Q9Z1D8 819 aa19■□□□□ 0.63
Shh-201ENSMUST00000002708 Prl3d1P18121 224 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Pfkfb1P70266 471 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Llgl2Q3TJ91 1027 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 CtcfQ61164 736 aaKnown RBP18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Znf532Q6NXK2 1036 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Tpcn2Q8BWC0 731 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 MetP16056 1379 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Slc1a4O35874 532 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Pla2g4fQ50L41 855 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Ints4Q8CIM8 964 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Riok1Q922Q2 567 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Stxbp4Q9WV89 557 aa18.99■□□□□ 0.63
Shh-201ENSMUST00000002708 Grin2dQ03391 1323 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 Sall1Q9ER74 1322 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 VeztQ3ZK22 780 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 Myh2G3UW82 1942 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 Panx2Q6IMP4 677 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 DymQ8CHY3 669 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 Dnaaf4Q8R368 420 aa18.98■□□□□ 0.63
Shh-201ENSMUST00000002708 Pde4dQ01063 747 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Larp6Q8BN59 492 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Zbtb43Q9DAI4 467 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Acot9Q9R0X4 439 aaKnown RBP18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Vnn1Q9Z0K8 512 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Hap1O35668 628 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Tpm1P58771 284 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 MbipQ99LQ1 341 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Rapgef4Q9EQZ6 1011 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Cdc45Q9Z1X9 566 aa18.97■□□□□ 0.63
Shh-201ENSMUST00000002708 Cyp26a1O55127 497 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Exoc5Q3TPX4 708 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Myl10Q62082 202 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Alx1Q8C8B0 326 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Arl8aQ8VEH3 186 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Nop2Q922K7 793 aaKnown RBP18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Prr5lA2AVJ5 370 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Usp13Q5BKP2 858 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Prkag3Q8BGM7 489 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Lrp6O88572 1613 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Znf326O88291 580 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Ms4a1P19437 291 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Slc38a10Q5I012 1090 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Pcdhb22Q91XZ8 794 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Casz1Q9CWL2 1761 aa18.96■□□□□ 0.63
Shh-201ENSMUST00000002708 Setdb1O88974 1307 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Wdr19Q3UGF1 1341 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Cyp3a59D3Z2W7 503 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Gm20425E9Q035 978 aaKnown RBP18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 SrprbP47758 269 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Pram1Q6BCL1 675 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Gm43638A0A0J9YU36 694 aa18.95■□□□□ 0.62
Shh-201ENSMUST00000002708 Plekhf1Q3TB82 279 aa18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms