RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GPHA2Q96T91 129 aa11.85□□□□□ -0.51
DDX39A-221ENST00000593026 TSNAXQ99598 290 aaKnown RBP11.85□□□□□ -0.51
DDX39A-221ENST00000593026 SRRQ9GZT4 340 aa11.85□□□□□ -0.51
DDX39A-221ENST00000593026 SERTAD4Q9NUC0 356 aa11.85□□□□□ -0.51
DDX39A-221ENST00000593026 STAB1Q9NY15 2570 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 DISC1C4P0D8 188 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 GPR31O00270 319 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 RRHO14718 337 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 FCGR3BO75015 233 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 SPDEFO95238 335 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 CRYZL1O95825 349 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 VSIG10L2P0DP72 767 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 LGALS7P47929 136 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 UCP3P55916 312 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 AP3S2P59780 193 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 CATR1Q13166 79 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 PLGLAQ15195 96 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 C5orf64Q2M2E5 130 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 AADACL3Q5VUY0 350 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 LHFPL1Q86WI0 220 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 CMTM1Q8IZ96 169 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 KLHDC1Q8N7A1 406 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 WFDC12Q8WWY7 111 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 TRIM63Q969Q1 353 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 PTTG2Q9NZH5 202 aa11.84□□□□□ -0.51
DDX39A-221ENST00000593026 SHOXO15266 292 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 IGHG2P01859 326 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 PGAM2P15259 253 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 S100GP29377 79 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 PPP5CP53041 499 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 ZNF45Q02386 682 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 PSG5Q15238 335 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 SLC35E3Q7Z769 313 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 TOMM5Q8N4H5 51 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 GDPD1Q8N9F7 314 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 OR51H1Q8NH63 302 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 OR4S2Q8NH73 311 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 TERB2Q8NHR7 220 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-221ENST00000593026 RSRP1Q9BUV0 290 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 ZNF747Q9BV97 191 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 FBXL15Q9H469 300 aa11.83□□□□□ -0.52
DDX39A-221ENST00000593026 KCNAB3O43448 404 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 SLC25A17O43808 307 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-221ENST00000593026 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 RLN1P04808 185 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 ZNF735P0CB33 412 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 FAUP35544 74 aaKnown RBP11.82□□□□□ -0.52
DDX39A-221ENST00000593026 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 LIN54Q6MZP7 749 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 LINC00299Q6ZSB3 139 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 SPAG16Q8N0X2 631 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 POC5Q8NA72 575 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 PRRT1Q99946 306 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 HSPB9Q9BQS6 159 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 MCUBQ9NWR8 336 aa11.82□□□□□ -0.52
DDX39A-221ENST00000593026 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
DDX39A-221ENST00000593026 IGLV2-23P01705 113 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 INPP1P49441 399 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 KLF9Q13886 244 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-221ENST00000593026 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 TRIQKQ629K1 86 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 SHISA2Q6UWI4 295 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 FOXRED2Q8IWF2 684 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 ZNF486Q96H40 463 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-221ENST00000593026 WNT10AQ9GZT5 417 aa11.81□□□□□ -0.52
DDX39A-221ENST00000593026 TENM1Q9UKZ4 2725 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 LINC01548A6NM66 108 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
DDX39A-221ENST00000593026 AP4M1O00189 453 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.523e-6■■■■□ 19.7
DDX39A-221ENST00000593026 RAMP3O60896 148 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 ECI1P42126 302 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 BAK1Q16611 211 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 ZNF57Q68EA5 555 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-221ENST00000593026 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 MARCH1Q8TCQ1 289 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 CD300LFQ8TDQ1 290 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 DEDD2Q8WXF8 326 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 AKIP1Q9NQ31 210 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 SLC2A9Q9NRM0 540 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 SLC2A8Q9NY64 477 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 SCP2D1Q9UJQ7 156 aa11.8□□□□□ -0.52
DDX39A-221ENST00000593026 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 PI3P19957 117 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 KRTAP10-3P60369 221 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 UBE2KP61086 200 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 SRSF4Q08170 494 aaKnown RBP11.79□□□□□ -0.52
DDX39A-221ENST00000593026 SURF2Q15527 256 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-221ENST00000593026 IDO2Q6ZQW0 420 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-221ENST00000593026 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
DDX39A-221ENST00000593026 PPP1R27Q86WC6 154 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms