RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 BVESQ8NE79 360 aa12.16□□□□□ -0.46
ERCC1-206ENST00000588300 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
ERCC1-206ENST00000588300 CCDC90BQ9GZT6 254 aa12.16□□□□□ -0.46
ERCC1-206ENST00000588300 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
ERCC1-206ENST00000588300 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
ERCC1-206ENST00000588300 RBM7Q9Y580 266 aaKnown RBP12.16□□□□□ -0.46
ERCC1-206ENST00000588300 TENM2Q9NT68 2774 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 AQP4P55087 323 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 DEFA5Q01523 94 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 C5orf30Q96GV9 206 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 MGLLQ99685 303 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 SPATA25Q9BR10 227 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 GINS4Q9BRT9 223 aa12.15□□□□□ -0.46
ERCC1-206ENST00000588300 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
ERCC1-206ENST00000588300 PDCD5O14737 125 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 APELAP0DMC3 54 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 DYRK1AQ13627 763 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 RPEL1Q2QD12 228 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 IL34Q6ZMJ4 242 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 PRSS48Q7RTY5 328 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 GTSCR1Q86UQ5 136 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 MAFIPQ8WZ33 124 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 CENPOQ9BU64 300 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 KRTAP3-2Q9BYR7 98 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 SIGLEC8Q9NYZ4 499 aa12.14□□□□□ -0.47
ERCC1-206ENST00000588300 A0A075B6Q4 140 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 A0A0B4J203 849 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 LCE6AA0A183 80 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 MSGN1A6NI15 193 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 MFNGO00587 321 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 OR9G9P0C7N8 305 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 HIST1H1DP16402 221 aaKnown RBP12.13□□□□□ -0.47
ERCC1-206ENST00000588300 GNB3P16520 340 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 UBE2KP61086 200 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 TNXAQ16473 311 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 Q8N402 240 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
ERCC1-206ENST00000588300 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
ERCC1-206ENST00000588300 SNAPC3Q92966 411 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 NKX1-2Q9UD57 310 aaPredicted RBP12.13□□□□□ -0.47
ERCC1-206ENST00000588300 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
ERCC1-206ENST00000588300 ADAM30Q9UKF2 790 aa12.13□□□□□ -0.47
ERCC1-206ENST00000588300 RAB27BO00194 218 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 MPPED1O15442 326 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 OR2A4O95047 310 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 CRYZL1O95825 349 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 CSN3P07498 182 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 RAB6AP20340 208 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 CRHBPP24387 322 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 DUTP33316 252 aaKnown RBP12.12□□□□□ -0.47
ERCC1-206ENST00000588300 TALDO1P37837 337 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 MAP2K4P45985 399 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 ARFRP1Q13795 201 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 PRSS8Q16651 343 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 HAGHQ16775 308 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
ERCC1-206ENST00000588300 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 DDB2Q92466 427 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 THAP7Q9BT49 309 aaPredicted RBP12.12□□□□□ -0.47
ERCC1-206ENST00000588300 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 PEMTQ9UBM1 199 aa12.12□□□□□ -0.47
ERCC1-206ENST00000588300 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 METTL21EPA6NDL7 271 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 IFITM5A6NNB3 132 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 LINC00473A8K010 186 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 CREBL2O60519 120 aaPredicted RBP12.11□□□□□ -0.47
ERCC1-206ENST00000588300 RBMXL2O75526 392 aaKnown RBP12.11□□□□□ -0.47
ERCC1-206ENST00000588300 IFNA6P05013 189 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 MYL9P24844 172 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 OR10A3P58181 314 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 TBCEQ15813 527 aaPredicted RBP12.11□□□□□ -0.47
ERCC1-206ENST00000588300 IDO2Q6ZQW0 420 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 Q6ZS49 121 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 H1FOOQ8IZA3 346 aaPredicted RBP12.11□□□□□ -0.47
ERCC1-206ENST00000588300 NRG4Q8WWG1 115 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
ERCC1-206ENST00000588300 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 STARD9Q9P2P6 4700 aa12.11□□□□□ -0.47
ERCC1-206ENST00000588300 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 AIREO43918 545 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 ACTL6BO94805 426 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 RHOGP84095 191 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
ERCC1-206ENST00000588300 ARL6IP1Q15041 203 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 ZNF367Q7RTV3 350 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 OR2K2Q8NGT1 345 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 AKIP1Q9NQ31 210 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 TNCP24821 2201 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms