RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
TMED1-203ENST00000588259 OR10R2Q8NGX6 335 aa12.96□□□□□ -0.33
TMED1-203ENST00000588259 NRG4Q8WWG1 115 aa12.96□□□□□ -0.33
TMED1-203ENST00000588259 ACOT12Q8WYK0 555 aa12.96□□□□□ -0.33
TMED1-203ENST00000588259 TMEM68Q96MH6 324 aa12.96□□□□□ -0.33
TMED1-203ENST00000588259 TINAGL1Q9GZM7 467 aaPredicted RBP12.96□□□□□ -0.33
TMED1-203ENST00000588259 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
TMED1-203ENST00000588259 TRBV6-7A0A0A0MS04 114 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 RRASP10301 218 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 HIST1H1DP16402 221 aaKnown RBP12.95□□□□□ -0.34
TMED1-203ENST00000588259 CRHBPP24387 322 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 TAGLNQ01995 201 aaKnown RBP12.95□□□□□ -0.34
TMED1-203ENST00000588259 TATDN3Q17R31 274 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 IDO2Q6ZQW0 420 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 ISOC1Q96CN7 298 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
TMED1-203ENST00000588259 ADAM30Q9UKF2 790 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 TENM2Q9NT68 2774 aa12.95□□□□□ -0.34
TMED1-203ENST00000588259 A0A0B4J203 849 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 MSGN1A6NI15 193 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 H0Y980 276 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 J3QRK9 145 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 MFNGO00587 321 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 ACTL6BO94805 426 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 CRYGBP07316 175 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 KLF5Q13887 457 aaPredicted RBP12.94□□□□□ -0.34
TMED1-203ENST00000588259 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 ZNF367Q7RTV3 350 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 Q8N1Y9 231 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 ADTRPQ96IZ2 230 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 DCUN1D5Q9BTE7 237 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 TUBA4BQ9H853 241 aa12.94□□□□□ -0.34
TMED1-203ENST00000588259 METTL21EPA6NDL7 271 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 IFITM5A6NNB3 132 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 SRRM4A7MD48 611 aaKnown RBP12.93□□□□□ -0.34
TMED1-203ENST00000588259 OR9G9P0C7N8 305 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 DYRK1AQ13627 763 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 ZNF343Q6P1L6 599 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 CNBD2Q96M20 576 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 ATG5Q9H1Y0 275 aa12.93□□□□□ -0.34
TMED1-203ENST00000588259 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
TMED1-203ENST00000588259 SMIM30A4D0T7 59 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 DIRAS3O95661 229 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 RAB3BP20337 219 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 RAB6AP20340 208 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 UBE2KP61086 200 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 RHOGP84095 191 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 TBCEQ15813 527 aaPredicted RBP12.92□□□□□ -0.34
TMED1-203ENST00000588259 SSX1Q16384 188 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 PRSS8Q16651 343 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 OR2B11Q5JQS5 317 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 SRSF12Q8WXF0 261 aaKnown RBP12.92□□□□□ -0.34
TMED1-203ENST00000588259 SNAPC3Q92966 411 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 C19orf73Q9NVV2 129 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 BLOC1S6Q9UL45 172 aa12.92□□□□□ -0.34
TMED1-203ENST00000588259 TRAV1-2A0A0B4J238 106 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 RAB27BO00194 218 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 CREBL2O60519 120 aaPredicted RBP12.91□□□□□ -0.34
TMED1-203ENST00000588259 PRH1P02810 166 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
TMED1-203ENST00000588259 EXOSC2Q13868 293 aaKnown RBP12.91□□□□□ -0.34
TMED1-203ENST00000588259 IZUMO2Q6UXV1 221 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 H1FOOQ8IZA3 346 aaPredicted RBP12.91□□□□□ -0.34
TMED1-203ENST00000588259 TEX45Q8NA69 505 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
TMED1-203ENST00000588259 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 ST6GALNAC5Q9BVH7 336 aa12.91□□□□□ -0.34
TMED1-203ENST00000588259 IGKV1D-8A0A087WSZ0 117 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 SHISA3A0PJX4 238 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 LINC00473A8K010 186 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 FCGR3BO75015 233 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 TUSC2O75896 110 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 OR2A4O95047 310 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 CSN3P07498 182 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 SAA1P0DJI8 122 aaPredicted RBP12.9□□□□□ -0.34
TMED1-203ENST00000588259 ATP5G2Q06055 141 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 C22orf42Q6IC83 251 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 IL34Q6ZMJ4 242 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 KCTD9Q7L273 389 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 Q8N402 240 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
TMED1-203ENST00000588259 CENPOQ9BU64 300 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 ZNF430Q9H8G1 570 aaPredicted RBP12.9□□□□□ -0.34
TMED1-203ENST00000588259 AKIP1Q9NQ31 210 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 NDUFB11Q9NX14 153 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 PEMTQ9UBM1 199 aa12.9□□□□□ -0.34
TMED1-203ENST00000588259 ELF5Q9UKW6 265 aaPredicted RBP12.9□□□□□ -0.34
TMED1-203ENST00000588259 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
TMED1-203ENST00000588259 A8MZ25 164 aa12.89□□□□□ -0.35
TMED1-203ENST00000588259 RBMXL2O75526 392 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms