RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 HAPLN4Q86UW8 402 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 IGFBPL1Q8WX77 278 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 RSG1Q9BU20 258 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 NIT2Q9NQR4 276 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
CCDC43-203ENST00000588210 PPP1R3CQ9UQK1 317 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 DSCAMO60469 2012 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 LRBAP50851 2863 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 SPG11Q96JI7 2443 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 SIRPB1O00241 398 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 SOD3P08294 240 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 CXCL1P09341 107 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 IAPPP10997 89 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 ARL16Q0P5N6 197 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 FAM90A2PQ658T7 463 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 OR51M1Q9H341 326 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 CBLN4Q9NTU7 201 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 GNG13Q9P2W3 67 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 KCNS2Q9ULS6 477 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 WIPI2Q9Y4P8 454 aa12.17□□□□□ -0.46
CCDC43-203ENST00000588210 CSMD1Q96PZ7 3565 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 AKAP6Q13023 2319 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 PGA5P0DJD9 388 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 HOXA5P20719 270 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 SERF2P84101 59 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 PNRC1Q12796 327 aaPredicted RBP12.16□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF726P1Q15940 193 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 LRRC75BQ2VPJ9 315 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 SPATA46Q5T0L3 261 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF343Q6P1L6 599 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 SCCPDHQ8NBX0 429 aa12.16□□□□□ -0.46
CCDC43-203ENST00000588210 BEX4Q9NWD9 120 aaPredicted RBP12.16□□□□□ -0.46
CCDC43-203ENST00000588210 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 TRAV39A0A0B4J263 110 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 RNF212BA8MTL3 300 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 LINC00587B1AMM8 73 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 OR4A8P0C604 315 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 ERVFRD-1P60508 538 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF146Q15072 292 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 DEFB113Q30KQ7 82 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 P2RX4Q99571 388 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF665Q9H7R5 613 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 SMPD2O60906 423 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 EFNB3Q15768 340 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 LILRB2Q8N423 598 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 PRR18Q8N4B5 295 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 DRAM1Q8N682 238 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 OR13D1Q8NGV5 346 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 RCC1LQ96I51 464 aaKnown RBP12.15□□□□□ -0.46
CCDC43-203ENST00000588210 WDR61Q9GZS3 305 aaKnown RBP12.15□□□□□ -0.46
CCDC43-203ENST00000588210 VSIRQ9H7M9 311 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 OR14J1Q9UGF5 321 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 RBM7Q9Y580 266 aaKnown RBP12.15□□□□□ -0.46
CCDC43-203ENST00000588210 PDZD2O15018 2839 aa12.15□□□□□ -0.46
CCDC43-203ENST00000588210 B9A039 149 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 OVOL3O00110 214 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 S100PP25815 95 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 RAB11AP62491 216 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 TMEM41BQ5BJD5 291 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 C11orf71Q6IPW1 123 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
CCDC43-203ENST00000588210 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 ZFP92A6NM28 416 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 ZNF16P17020 682 aaPredicted RBP12.14□□□□□ -0.47
CCDC43-203ENST00000588210 CDX1P47902 265 aaPredicted RBP12.14□□□□□ -0.47
CCDC43-203ENST00000588210 RND2P52198 227 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 PPP1CBP62140 327 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 PMS2P11Q13670 270 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 LCN15Q6UWW0 184 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 SSX7Q7RTT5 188 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
CCDC43-203ENST00000588210 POLQO75417 2590 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
CCDC43-203ENST00000588210 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 SH2D1BO14796 132 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 NXPH2O95156 264 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 PAX1P15863 534 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 TUBG1P23258 451 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 CEACAM6P40199 344 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 TMEM14EPQ6UXP3 125 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 LRRC75A-AS1Q8N1F1 130 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 ZBTB34Q8NCN2 500 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 FOXC2Q99958 501 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 TOLLIPQ9H0E2 274 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 TUBG2Q9NRH3 451 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
CCDC43-203ENST00000588210 KIAA2026Q5HYC2 2103 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms