RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 RHOVQ96L33 236 aa14.37□□□□□ -0.11
LINC01238-205ENST00000567549 NXF2Q9GZY0 626 aaKnown RBP14.37□□□□□ -0.11
LINC01238-205ENST00000567549 KCNK15Q9H427 330 aa14.37□□□□□ -0.11
LINC01238-205ENST00000567549 RDH8Q9NYR8 311 aa14.37□□□□□ -0.11
LINC01238-205ENST00000567549 GAB2Q9UQC2 676 aa14.37□□□□□ -0.11
LINC01238-205ENST00000567549 AK6Q9Y3D8 172 aaKnown RBP14.37□□□□□ -0.11
LINC01238-205ENST00000567549 RBM7Q9Y580 266 aaKnown RBP14.37□□□□□ -0.11
LINC01238-205ENST00000567549 A0A0A6YYD4 124 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 FCN1O00602 326 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 SLC25A17O43808 307 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 CREBL2O60519 120 aaPredicted RBP14.36□□□□□ -0.11
LINC01238-205ENST00000567549 SPNP16150 400 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 TGFBR1P36897 503 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 SGPP2Q8IWX5 399 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 RAB3CQ96E17 227 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 RBMXL1Q96E39 390 aaKnown RBP14.36□□□□□ -0.11
LINC01238-205ENST00000567549 ADTRPQ96IZ2 230 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 MS4A10Q96PG2 267 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 RCHY1Q96PM5 261 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 HDHD3Q9BSH5 251 aaPredicted RBP14.36□□□□□ -0.11
LINC01238-205ENST00000567549 FAM103A1Q9BTL3 118 aaKnown RBP14.36□□□□□ -0.11
LINC01238-205ENST00000567549 ALX4Q9H161 411 aaPredicted RBP14.36□□□□□ -0.11
LINC01238-205ENST00000567549 NBEAL2Q6ZNJ1 2754 aa14.36□□□□□ -0.11
LINC01238-205ENST00000567549 A0A075B6Q4 140 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 TRAV1-2A0A0B4J238 106 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 METTL21EPA6NDL7 271 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 FABP7O15540 132 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 IGHV3-11P01762 117 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 IGKV1-16P04430 117 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 EGR2P11161 476 aaPredicted RBP14.35□□□□□ -0.11
LINC01238-205ENST00000567549 MYL9P24844 172 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 SDC2P34741 201 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 C2orf76Q3KRA6 126 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 DRAXINQ8NBI3 349 aaPredicted RBP14.35□□□□□ -0.11
LINC01238-205ENST00000567549 MUC7Q8TAX7 377 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 S100ZQ8WXG8 99 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 SLC25A46Q96AG3 418 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 HARBI1Q96MB7 349 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 PARP12Q9H0J9 701 aaKnown RBP14.35□□□□□ -0.11
LINC01238-205ENST00000567549 TPSG1Q9NRR2 321 aa14.35□□□□□ -0.11
LINC01238-205ENST00000567549 FOXI3A8MTJ6 420 aaPredicted RBP14.34□□□□□ -0.11
LINC01238-205ENST00000567549 H0Y980 276 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 BRI3O95415 125 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 TALDO1P37837 337 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 TMEM50BP56557 158 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 ZNF383Q8NA42 475 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 AP3S1Q92572 193 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 USMG5Q96IX5 58 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 GINS4Q9BRT9 223 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 RSRP1Q9BUV0 290 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 OR2D2Q9H210 308 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 PALMDQ9NP74 551 aa14.34□□□□□ -0.11
LINC01238-205ENST00000567549 BET1O15155 118 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 SHOXO15266 292 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 FRMD6-AS1P0C7T7 363 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 S100A5P33763 92 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 VMA21Q3ZAQ7 101 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 FAM209BQ5JX69 171 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 CASTOR1Q8WTX7 329 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 PHB2Q99623 299 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 CABLES2Q9BTV7 478 aa14.33□□□□□ -0.12
LINC01238-205ENST00000567549 LDLRAD4O15165 306 aa14.32□□□□□ -0.12
LINC01238-205ENST00000567549 FCGR3AP08637 254 aa14.32□□□□□ -0.12
LINC01238-205ENST00000567549 RAB6AP20340 208 aa14.32□□□□□ -0.12
LINC01238-205ENST00000567549 SRSF7Q16629 238 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC01238-205ENST00000567549 SBSPONQ8IVN8 264 aa14.32□□□□□ -0.12
LINC01238-205ENST00000567549 DNAH9Q9NYC9 4486 aa14.32□□□□□ -0.12
LINC01238-205ENST00000567549 KMT2CQ8NEZ4 4911 aaKnown RBP14.32□□□□□ -0.12
LINC01238-205ENST00000567549 TRBV6-7A0A0A0MS04 114 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 A0A0B4J203 849 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 TMEM127O75204 238 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 ACTL6BO94805 426 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 CLDN12P56749 244 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 MXD1Q05195 221 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 ARFRP1Q13795 201 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 ZNF846Q147U1 533 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 TMEM177Q53S58 311 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 GTSCR1Q86UQ5 136 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 OR10R2Q8NGX6 335 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 ACOT12Q8WYK0 555 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 CYYR1Q96J86 154 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 COA4Q9NYJ1 87 aa14.31□□□□□ -0.12
LINC01238-205ENST00000567549 TMEM272A0A1B0GTI8 110 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 MPPED1O15442 326 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 PROP1O75360 226 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 SCGNO76038 276 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 SLC22A5O76082 557 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 IGLV1-51P01701 117 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 LYL1P12980 280 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 PLAC9Q5JTB6 97 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 HES5Q5TA89 166 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 LCN12Q6JVE5 192 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 MZT2AQ6P582 158 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 OVCH2Q7RTZ1 564 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 TEX45Q8NA69 505 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 OR5T1Q8NG75 326 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 OSR1Q8TAX0 266 aaPredicted RBP14.3□□□□□ -0.12
LINC01238-205ENST00000567549 KCTD12Q96CX2 325 aaKnown RBP14.3□□□□□ -0.12
LINC01238-205ENST00000567549 GFI1Q99684 422 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms