RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 NDUFA6P56556 154 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 B3GALT5-AS1P59052 145 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CD81P60033 236 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 RAB11AP62491 216 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 DLK1P80370 383 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ARF1P84077 181 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 DEFA6Q01524 100 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 SRYQ05066 204 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 RNPS1Q15287 305 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TBC1D28Q2M2D7 210 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM41BQ5BJD5 291 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 IGSF11Q5DX21 431 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ACER2Q5QJU3 275 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 C9orf135Q5VTT2 229 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 NCR3LG1Q68D85 454 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 KCNIP4Q6PIL6 250 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 HEPN1Q6WQI6 88 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 RBMS3Q6XE24 437 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF818PQ6ZRF7 136 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CALHM1Q8IU99 346 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 FAM58AQ8N1B3 248 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CYB561D1Q8N8Q1 229 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF709Q8N972 641 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 OR10G4Q8NGN3 311 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ABHD3Q8WU67 409 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CT55Q8WUE5 264 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 IL1F10Q8WWZ1 152 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 GTF3AQ92664 365 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 LSM10Q969L4 123 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 S100PBPQ96BU1 408 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MUCL1Q96DR8 90 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 BSCL2Q96G97 398 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 IP6K3Q96PC2 410 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TAAR6Q96RI8 345 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 P2RX4Q99571 388 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CABLES2Q9BTV7 478 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CTDSP1Q9GZU7 261 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CALHM2Q9HA72 323 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CDH20Q9HBT6 801 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MANBALQ9NQG1 85 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CCL28Q9NRJ3 127 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 GLRX2Q9NS18 164 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 P4HTMQ9NXG6 502 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 PSENENQ9NZ42 101 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CISD1Q9NZ45 108 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CACNG5Q9UF02 275 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MIOXQ9UGB7 285 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 VAX2Q9UIW0 290 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TRAPPC2LQ9UL33 140 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 LAMP3Q9UQV4 416 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 KLF13Q9Y2Y9 288 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 OR2W1Q9Y3N9 320 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 LOXL2Q9Y4K0 774 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MMP24Q9Y5R2 645 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 SDK2Q58EX2 2172 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ANKHD1Q8IWZ3 2542 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 RP1L1Q8IWN7 2480 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV3D-15A0A087WSY6 115 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TRBV6-6A0A0A6YYG2 114 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 LY6G6EA0A0G2JKS1 128 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 A0A0G2JMM0 328 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 A0A1W2PPB8 328 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 A0A1W2PRS3 328 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM30CPA0ZSE6 113 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SMCO3A2RU48 225 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 MAP1LC3B2A6NCE7 125 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CEBPZOSA8MTT3 80 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF727A8MUV8 499 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 KIR3DP1A8MWS1 328 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 FAM90A26D6RGX4 464 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NPIPB11E5RHQ5 1161 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 H0YL77 283 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NTN3O00634 580 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 HS3ST1O14792 307 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SYNGR2O43760 224 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CHST1O43916 411 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 PGLYRP1O75594 196 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 KLF7O75840 302 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TUSC2O75896 110 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NXPH2O95156 264 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 PTBP3O95758 552 aaKnown RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CLDN1O95832 211 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NAPSAO96009 420 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 MT-CO3P00414 261 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 IGHV3-9P01782 118 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 IGHV2-5P01817 119 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 HLA-HP01893 362 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 SCTP09683 121 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 OR8U8P0C7N1 319 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 METTL15P1P0C7V9 234 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 RNF224P0DH78 156 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 IAPPP10997 89 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 PSG2P11465 335 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 TUBG1P23258 451 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ANOS1P23352 680 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 CDX1P47902 265 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-241ENST00000556374 GLIPR1P48060 266 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 NPBWR2P48146 333 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 ASCL1P50553 236 aa3.69□□□□□ -1.82
ATXN3-241ENST00000556374 UBE2NP61088 152 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms