RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 CD74P04233 296 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 SSBP2P81877 361 aaPredicted RBP12.88□□□□□ -0.35
GCN1-209ENST00000551920 ZNF79Q15937 498 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 AADACL3Q5VUY0 350 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 ZNF329Q86UD4 541 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 CCDC190Q86UF4 302 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 OR6F1Q8NGZ6 308 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 TCTEX1D2Q8WW35 142 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 TSNAXQ99598 290 aaKnown RBP12.88□□□□□ -0.35
GCN1-209ENST00000551920 HSD17B10Q99714 261 aaKnown RBP12.88□□□□□ -0.35
GCN1-209ENST00000551920 CITED2Q99967 270 aaPredicted RBP12.88□□□□□ -0.35
GCN1-209ENST00000551920 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 METTL1Q9UBP6 276 aaKnown RBP12.88□□□□□ -0.35
GCN1-209ENST00000551920 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
GCN1-209ENST00000551920 FABP12A6NFH5 140 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 AP4M1O00189 453 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 ATP6V0E1O15342 81 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 KCNAB3O43448 404 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 GSTZ1O43708 216 aaPredicted RBP12.87□□□□□ -0.35
GCN1-209ENST00000551920 CRYGBP07316 175 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 RRASP10301 218 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 TBPP20226 339 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 TAGLNQ01995 201 aaKnown RBP12.87□□□□□ -0.35
GCN1-209ENST00000551920 CFHR3Q02985 330 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 MRGPRG-AS1Q2M3A8 158 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 RNASE10Q5GAN6 216 aaKnown RBP12.87□□□□□ -0.35
GCN1-209ENST00000551920 LIN54Q6MZP7 749 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 FAAP20Q6NZ36 180 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 ZNF66Q6ZN08 573 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 MFSD4AQ8N468 514 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 TMEM229BQ8NBD8 167 aa12.87□□□□□ -0.35
GCN1-209ENST00000551920 FBN3Q75N90 2809 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 PSMB11A5LHX3 300 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 SHOXO15266 292 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 RAMP3O60896 148 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 TSPAN15O95858 294 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 IGF1P05019 195 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 TSPAN5P62079 268 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 CX3CL1P78423 397 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 SSBP1Q04837 148 aaKnown RBP12.86□□□□□ -0.35
GCN1-209ENST00000551920 PJVKQ0ZLH3 352 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 PLGLAQ15195 96 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
GCN1-209ENST00000551920 LHFPL1Q86WI0 220 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 ZBTB34Q8NCN2 500 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 CHPT1Q8WUD6 406 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 TRIM63Q969Q1 353 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 CLCC1Q96S66 551 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 OR51J1Q9H342 316 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 PARP11Q9NR21 331 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 RABL2AQ9UBK7 228 aaPredicted RBP12.86□□□□□ -0.35
GCN1-209ENST00000551920 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
GCN1-209ENST00000551920 CA2P00918 260 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 RLN1P04808 185 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
GCN1-209ENST00000551920 LGALS7P47929 136 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 TAS2R19P59542 299 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 CD83Q01151 205 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 CBX3Q13185 183 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 C19orf54Q5BKX5 351 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 PRR31Q5SQ13 230 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 VKORC1L1Q8N0U8 176 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 OR6Q1Q8NGQ2 317 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 OR51H1Q8NH63 302 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
GCN1-209ENST00000551920 MRGPRFQ96AM1 343 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 PRELID3BQ9Y3B1 194 aa12.85□□□□□ -0.35
GCN1-209ENST00000551920 G3V318 75 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
GCN1-209ENST00000551920 PGLYRP1O75594 196 aaPredicted RBP12.84□□□□□ -0.35
GCN1-209ENST00000551920 RAB3DO95716 219 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
GCN1-209ENST00000551920 S100A5P33763 92 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 UBE2KP61086 200 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 PHLDA2Q53GA4 152 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 PPP1R27Q86WC6 154 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 OR4C16Q8NGL9 310 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 OR4S2Q8NH73 311 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 RSRP1Q9BUV0 290 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 MGAM2Q2M2H8 2515 aa12.84□□□□□ -0.35
GCN1-209ENST00000551920 NBEAL1Q6ZS30 2694 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 A6NHS1 94 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 GPR31O00270 319 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 IFNA6P05013 189 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 CSF1P09603 554 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 ETV6P41212 452 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
GCN1-209ENST00000551920 PPP5CP53041 499 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 LCNL1Q6ZST4 164 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 SPAG16Q8N0X2 631 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms