RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GSTT2BP0CG30 244 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 HSMCR30P0CW71 290 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 PSMA1P25786 263 aaKnown RBP16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 RANBP1P43487 201 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 TATDN3Q17R31 274 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 LCN12Q6JVE5 192 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 Q8N402 240 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 OR10J5Q8NHC4 309 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 VCXQ9H320 206 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 DUSP21Q9H596 190 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 RAB22AQ9UL26 194 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 V9GY05 133 aa16.49■□□□□ 0.23
SMARCC2-210ENST00000550519 TMEM272A0A1B0GTI8 110 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 MSGN1A6NI15 193 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 OR2A4O95047 310 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 RRASP10301 218 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 CALRP27797 417 aaKnown RBP16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 MECP2P51608 486 aaKnown RBP16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 MRPS15P82914 257 aaKnown RBP16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 CBX3Q13185 183 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 RTL8BQ17RB0 113 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 RPEL1Q2QD12 228 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 GTSCR1Q86UQ5 136 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 TEX45Q8NA69 505 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 ADAD2Q8NCV1 583 aaKnown RBP16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 RAB3CQ96E17 227 aa16.48■□□□□ 0.23
SMARCC2-210ENST00000550519 IZUMO1RA6ND01 250 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 APELAP0DMC3 54 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 PSMD7P51665 324 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 FABP5Q01469 135 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 MLLT11Q13015 90 aaPredicted RBP16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 DDB2Q92466 427 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 SNAPC3Q92966 411 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 PHB2Q99623 299 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 TUBA4BQ9H853 241 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 TPRKBQ9Y3C4 175 aa16.47■□□□□ 0.23
SMARCC2-210ENST00000550519 IFNA6P05013 189 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 OR9G9P0C7N8 305 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 UBE2KP61086 200 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 PRSS8Q16651 343 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 VMA21Q3ZAQ7 101 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 HES5Q5TA89 166 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 ADAMTSL5Q6ZMM2 481 aa16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 SRSF12Q8WXF0 261 aaKnown RBP16.46■□□□□ 0.23
SMARCC2-210ENST00000550519 MFNGO00587 321 aa16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 DUTP33316 252 aaKnown RBP16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 TNXAQ16473 311 aa16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 LINC00322Q6ZN03 302 aaPredicted RBP16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 OR2K2Q8NGT1 345 aa16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 OR10R2Q8NGX6 335 aa16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 MAFIPQ8WZ33 124 aa16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 ADTRPQ96IZ2 230 aa16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 ZNF230Q9UIE0 474 aaPredicted RBP16.45■□□□□ 0.22
SMARCC2-210ENST00000550519 RAB27BO00194 218 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 BMPR1BO00238 502 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 RGS10O43665 173 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 GNB3P16520 340 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 IDO2Q6ZQW0 420 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 MGLLQ99685 303 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 ACOT13Q9NPJ3 140 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 AKIP1Q9NQ31 210 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 PEMTQ9UBM1 199 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 RBM7Q9Y580 266 aaKnown RBP16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 BIRC6Q9NR09 4857 aa16.44■□□□□ 0.22
SMARCC2-210ENST00000550519 TRBV9A0A0B4J1U6 114 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 A0A0B4J203 849 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 SHISA3A0PJX4 238 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 FAM223BA6NKX1 122 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 LINC00473A8K010 186 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 AIREO43918 545 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 CRYZL1O95825 349 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 HIST1H1DP16402 221 aaKnown RBP16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 RHOGP84095 191 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 Q6ZS49 121 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 FAM223AQ8IWN6 122 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 H1FOOQ8IZA3 346 aaPredicted RBP16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 OSR1Q8TAX0 266 aaPredicted RBP16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 GINS4Q9BRT9 223 aa16.43■□□□□ 0.22
SMARCC2-210ENST00000550519 GADD45AP24522 165 aa16.42■□□□□ 0.22
SMARCC2-210ENST00000550519 ZNF45Q02386 682 aa16.42■□□□□ 0.22
SMARCC2-210ENST00000550519 CENPOQ9BU64 300 aa16.42■□□□□ 0.22
SMARCC2-210ENST00000550519 HIPK2Q9H2X6 1198 aa16.42■□□□□ 0.22
SMARCC2-210ENST00000550519 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 ERICH4A6NGS2 130 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 MPPED1O15442 326 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 PRH1P02810 166 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 RAB6AP20340 208 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 AQP4P55087 323 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 ATP5G2Q06055 141 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 EXOSC2Q13868 293 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 PRSS48Q7RTY5 328 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 LAX1Q8IWV1 398 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 ACOT12Q8WYK0 555 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 CCDC90BQ9GZT6 254 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 ZNF430Q9H8G1 570 aaPredicted RBP16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 CEPT1Q9Y6K0 416 aa16.41■□□□□ 0.22
SMARCC2-210ENST00000550519 A0A075B6Q4 140 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 IGKV1D-8A0A087WSZ0 117 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 TRAV1-2A0A0B4J238 106 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 IFITM5A6NNB3 132 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms