RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 OR1L1Q8NH94 360 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM222BQ8WU58 562 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 LINC00052Q96N35 136 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 OR4C12Q96R67 309 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 TMEM167BQ9NRX6 74 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 DLL3Q9NYJ7 618 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 CACNA1DQ01668 2161 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 A0A1W2PP11 408 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 OR2C1O95371 312 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 IGHMP01871 453 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM78BQ5VT40 261 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 PNKDQ8N490 385 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 OR4X1Q8NH49 305 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 LHFPL5Q8TAF8 219 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 SSMEM1Q8WWF3 244 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 NEU1Q99519 415 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 NEUROG3Q9Y4Z2 214 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 IGHV3-21A0A0B4J1V1 117 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF729A6NN14 1252 aaPredicted RBP5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 NPIPB9F8W1W9 429 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 G3V3Q6 166 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 HLA-GP17693 338 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 CDKN1AP38936 164 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 EFNB2P52799 333 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 TMEM30BQ3MIR4 351 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF66Q6ZN08 573 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 SCMH1Q96GD3 660 aa5.9□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM208BQ5VWN6 2430 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 IGHV2OR16-5A0A0B4J2B6 119 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 A0A1B0GU03 582 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 LINC00587B1AMM8 73 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 MPDU1O75352 247 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 NEURL1O76050 574 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 INHBBP09529 407 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 GALR1P47211 349 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 KLF9Q13886 244 aaPredicted RBP5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 SLC25A53Q5H9E4 307 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM162BQ5T6X4 162 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 SAXO1Q8IYX7 474 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 CDC42EP3Q9UKI2 254 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 TBL2Q9Y4P3 447 aaKnown RBP5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 NOTCH2Q04721 2471 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 PSMB11A5LHX3 300 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM8BA6NDV4 472 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 IGHV1-2P23083 117 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 LHX2P50458 406 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 CLDN18P56856 261 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 RPL8P62917 257 aaKnown RBP5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 FABP9Q0Z7S8 132 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 NRN1LQ496H8 165 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 C17orf82Q86X59 251 aaPredicted RBP5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 ALX4Q9H161 411 aaPredicted RBP5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 CLCF1Q9UBD9 225 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 MMP24Q9Y5R2 645 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 PKDREJQ9NTG1 2253 aa5.9□□□□□ -1.47
SRGAP1-206ENST00000543397 CORTO00230 105 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 LYL1P12980 280 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 GNG4P50150 75 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 CSRP3P50461 194 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 DUX4L9Q6RFH8 374 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 DNM1P46Q6ZS02 220 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 OR4A5Q8NH83 315 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SSBP3Q9BWW4 388 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 C7orf69Q9H7B7 122 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 ABCA1O95477 2261 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 THSD7BQ9C0I4 1608 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 A0A1W2PS18 150 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SLC6A1P30531 599 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SRSF6Q13247 344 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SLC16A13Q7RTY0 426 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TCTEX1D1Q8N7M0 179 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 RNASEH2CQ8TDP1 164 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM186Q96B77 213 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 PRR13Q9NZ81 148 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SIRT4Q9Y6E7 314 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TGIF2-C20orf24A0A0A6YYL0 155 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 A0A0U1RRA0 63 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 IZUMO4Q1ZYL8 232 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 C10orf113Q5VZT2 155 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TEPPQ6URK8 271 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 FLVCR1-AS1Q8TAF5 88 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 MRPL24Q96A35 216 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 AICDAQ9GZX7 198 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 LPAR5Q9H1C0 372 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 ZDHHC11Q9H8X9 412 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 DEPPQ9NTK1 212 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 JPT1Q9UK76 154 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 PTPRFP10586 1907 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TRBV5-5A0A0J9YX44 114 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 HIST1H1EP10412 219 aaKnown RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 P2RY1P47900 373 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TFPI2P48307 235 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 P2RY4P51582 365 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM33P57088 247 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TPPP2P59282 170 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 CLEC12BQ2HXU8 276 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms