RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CYB5R2Q6BCY4 276 aa8.93□□□□□ -0.98
CCDC90B-218ENST00000533761 FAM219AQ8IW50 185 aa8.93□□□□□ -0.98
CCDC90B-218ENST00000533761 ZNF439Q8NDP4 499 aa8.93□□□□□ -0.98
CCDC90B-218ENST00000533761 POLR3KQ9Y2Y1 108 aaPredicted RBP8.93□□□□□ -0.98
CCDC90B-218ENST00000533761 CR1P17927 2039 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 IGHV2-26A0A0B4J1V2 119 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 IGHV2-70DA0A0C4DH43 119 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 A8MV72 311 aaPredicted RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 TGFAP01135 160 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 APOA2P02652 100 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 HOXB5P09067 269 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 PRTN3P24158 256 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 DUTP33316 252 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 RAB13P51153 203 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 ZNF134P52741 427 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 H2BFSP57053 126 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 ERVK-16P61578 105 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 SRSF4Q08170 494 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 DHRS7BQ6IAN0 325 aaPredicted RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 SPAG16Q8N0X2 631 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 OR4S2Q8NH73 311 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 C2orf50Q96LR7 162 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 FYTTD1Q96QD9 318 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 MRPL18Q9H0U6 180 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 UNKLQ9H9P5 680 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 LPAR2Q9HBW0 351 aa8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 YLPM1P49750 1951 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-218ENST00000533761 TRAV20A0A0B4J274 112 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 F8W735 103 aaPredicted RBP8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 MMP23AO75900 390 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 HPRT1P00492 218 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 RLN2P04090 185 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 IGHV4-31P0DP07 118 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 SLC25A6P12236 298 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 EPHA1P21709 976 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 GATA3P23771 443 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ZFP36P26651 326 aaKnown RBP8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ARHGDIBP52566 201 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ZNF137PP52743 207 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ARF6P62330 175 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 IAH1Q2TAA2 248 aaPredicted RBP8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ZNF833PQ6ZTB9 187 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 NOXA1Q86UR1 476 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 SLC35G3Q8N808 338 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 THAP6Q8TBB0 222 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 LEAP2Q969E1 77 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 LSM10Q969L4 123 aaKnown RBP8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 PCGF1Q9BSM1 259 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 PLEKHA2Q9HB19 425 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ACANP16112 2415 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ZANQ9Y493 2812 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 ABCA1O95477 2261 aa8.91□□□□□ -0.98
CCDC90B-218ENST00000533761 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.91□□□□□ -0.984e-7■■■■□ 26.6
CCDC90B-218ENST00000533761 ADAP1O75689 374 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 IGHV3-7P01780 117 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 MC5RP33032 325 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 EIF4EBP1Q13541 118 aaPredicted RBP8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 GGNBP1Q5YKI7 109 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 TGIF2LXQ8IUE1 241 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 HIF1ANQ9NWT6 349 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 GSKIPQ9P0R6 139 aa8.9□□□□□ -0.98
CCDC90B-218ENST00000533761 A0A1B0GU03 582 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 A0A1W2PPE3 182 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 CCSO14618 274 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 SLC31A2O15432 143 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 TOX4O94842 621 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 HRASP01112 189 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 PSMB6P28072 239 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 HTR1DP28221 377 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 NUP62P37198 522 aaPredicted RBP8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 DVL1P1P54792 670 aaPredicted RBP8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 LGALS4P56470 323 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 HLA-DRB5Q30154 266 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 RPL39P5Q59GN2 51 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 CCDC144NLQ6NUI1 221 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 Q6ZS46 218 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 LYZL2Q7Z4W2 148 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 C11orf42Q8N5U0 333 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 OR11H6Q8NGC7 330 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 PPP1R1CQ8WVI7 109 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 RPEQ96AT9 228 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 MMP26Q9NRE1 261 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 CSPG4Q6UVK1 2322 aa8.9□□□□□ -0.99
CCDC90B-218ENST00000533761 AKAP9Q99996 3911 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 WNK2Q9Y3S1 2297 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 LEUTXA8MZ59 168 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 FCGR3BO75015 233 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 SIX6O95475 246 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 IGLV1-47P01700 117 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 GAPDHP04406 335 aaKnown RBP8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 NQO2P16083 231 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 PVALBP20472 110 aaPredicted RBP8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 COX7A1P24310 79 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 LPAR6P43657 344 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 PAX2Q02962 417 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 DCAF12L2Q5VW00 463 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 PDPNQ86YL7 162 aa8.89□□□□□ -0.99
CCDC90B-218ENST00000533761 ODF3L1Q8IXM7 274 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms