RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 KLF5Q13887 457 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 Q8N1Y9 231 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 OR9G4Q8NGQ1 327 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 NRG4Q8WWG1 115 aa17.13■□□□□ 0.33
TRAPPC4-208ENST00000527680 MSGN1A6NI15 193 aa17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 SRRM4A7MD48 611 aaKnown RBP17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 H0Y980 276 aa17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 CRHBPP24387 322 aa17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 SSBP2P81877 361 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 VMA21Q3ZAQ7 101 aa17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 TMEM177Q53S58 311 aa17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 CABLES2Q9BTV7 478 aa17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 TINAGL1Q9GZM7 467 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-208ENST00000527680 METTL21EPA6NDL7 271 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 MPPED1O15442 326 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 MYL9P24844 172 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 OR10A3P58181 314 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 TNXAQ16473 311 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 USMG5Q96IX5 58 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 ADTRPQ96IZ2 230 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 CITED4Q96RK1 184 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 CENPOQ9BU64 300 aa17.11■□□□□ 0.33
TRAPPC4-208ENST00000527680 J3QRK9 145 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 CRYZL1O95825 349 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 RPEL1Q2QD12 228 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 ACOT12Q8WYK0 555 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 TM2D3Q9BRN9 247 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 DCUN1D5Q9BTE7 237 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 TUBA4BQ9H853 241 aa17.1■□□□□ 0.33
TRAPPC4-208ENST00000527680 TRAV1-2A0A0B4J238 106 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 IFITM5A6NNB3 132 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 DIRAS3O95661 229 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 HIST1H1DP16402 221 aaKnown RBP17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 ZNF343Q6P1L6 599 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 IDO2Q6ZQW0 420 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 TEX45Q8NA69 505 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 SNAPC3Q92966 411 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 C5orf30Q96GV9 206 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 ATG5Q9H1Y0 275 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 C19orf73Q9NVV2 129 aa17.09■□□□□ 0.33
TRAPPC4-208ENST00000527680 A0A0B4J203 849 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 RAB27BO00194 218 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 MFNGO00587 321 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 ACTL6BO94805 426 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 BRI3O95415 125 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 TRBV12-3P01733 135 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 RAB3BP20337 219 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 RAB6AP20340 208 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 UBE2KP61086 200 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 PRSS8Q16651 343 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 ZFAND6Q6FIF0 208 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 GTSCR1Q86UQ5 136 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 ADAM30Q9UKF2 790 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 TNCP24821 2201 aa17.08■□□□□ 0.32
TRAPPC4-208ENST00000527680 A8MZ25 164 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 OR9G9P0C7N8 305 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 DUTP33316 252 aaKnown RBP17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 DYRK1AQ13627 763 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 SSX1Q16384 188 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 IL34Q6ZMJ4 242 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 ZNF367Q7RTV3 350 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 SRSF12Q8WXF0 261 aaKnown RBP17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 CNBD2Q96M20 576 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 ST6GALNAC5Q9BVH7 336 aa17.07■□□□□ 0.32
TRAPPC4-208ENST00000527680 LCN12Q6JVE5 192 aa17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 H1FOOQ8IZA3 346 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 ADAD2Q8NCV1 583 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 OSR1Q8TAX0 266 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 ISOC1Q96CN7 298 aa17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 VCX3BQ9H321 246 aa17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 PEMTQ9UBM1 199 aa17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 BLOC1S6Q9UL45 172 aa17.06■□□□□ 0.32
TRAPPC4-208ENST00000527680 SHISA3A0PJX4 238 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 LINC00473A8K010 186 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 PRH1P02810 166 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 CSN3P07498 182 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 RHOGP84095 191 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 ATP5G2Q06055 141 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 ARL6IP1Q15041 203 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 TBCEQ15813 527 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 MRGPRG-AS1Q2M3A8 158 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 CDNFQ49AH0 187 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 DDB2Q92466 427 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 SPATA25Q9BR10 227 aa17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 ELF5Q9UKW6 265 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-208ENST00000527680 IGKV1D-8A0A087WSZ0 117 aa17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 TRDV1A0A1B0GX56 115 aa17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 FCGR3BO75015 233 aa17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 C22orf42Q6IC83 251 aa17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 Q8N402 240 aa17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 AKIP1Q9NQ31 210 aa17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 GAR1Q9NY12 217 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-208ENST00000527680 TENM2Q9NT68 2774 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 SMIM30A4D0T7 59 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 CREBL2O60519 120 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 RBMXL2O75526 392 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 TUSC2O75896 110 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 OR2A4O95047 310 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 IFNA6P05013 189 aa17.03■□□□□ 0.32
TRAPPC4-208ENST00000527680 HAGHQ16775 308 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms