RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 MTCH1Q9NZJ7 389 aa3.93□□□□□ -1.78
NEK1-204ENST00000509912 SEC14L4Q9UDX3 406 aa3.93□□□□□ -1.78
NEK1-204ENST00000509912 NUFIP1Q9UHK0 495 aaKnown RBP3.93□□□□□ -1.78
NEK1-204ENST00000509912 EXOGQ9Y2C4 368 aaKnown RBP3.93□□□□□ -1.78
NEK1-204ENST00000509912 V9GYS6 101 aa3.93□□□□□ -1.78
NEK1-204ENST00000509912 A0A087WUU8 490 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 SRSF10O75494 262 aaKnown RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 APOC3P02656 99 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 PPBPP02775 128 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ALDOBP05062 364 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ISG15P05161 165 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 MELTFP08582 738 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 GKN3PP0CG01 181 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 SRMP19623 302 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 CRIP2P52943 208 aaPredicted RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 TMBIM6P55061 237 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 CDK5Q00535 292 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 BDH1Q02338 343 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 MICBQ29980 383 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 RSPO1Q2MKA7 263 aaPredicted RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 BTNL3Q6UXE8 466 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 C9orf47Q6ZRZ4 202 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 BOD1L2Q8IYS8 172 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ZCCHC24Q8N2G6 241 aaKnown RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 FTMTQ8N4E7 242 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 BPIFB2Q8N4F0 458 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 SDR9C7Q8NEX9 313 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 OR5A2Q8NGI9 324 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 RORBQ92753 470 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 AKR1E2Q96JD6 320 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 PRRT1Q99946 306 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 HCAR1Q9BXC0 346 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ACOT13Q9NPJ3 140 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 CMC2Q9NRP2 79 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 TMEM100Q9NV29 134 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 MCUBQ9NWR8 336 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 KLK11Q9UBX7 282 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 MRPS28Q9Y2Q9 187 aaKnown RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 WIPI2Q9Y4P8 454 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 C17orf98A8MV24 154 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 G3V4G9 280 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ENTPD6O75354 484 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 CD79AP11912 226 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 SLC2A5P22732 501 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 PRTN3P24158 256 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 COL8A2P25067 703 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 TGFBR1P36897 503 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 UBE2E1P51965 193 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 CDC42P60953 191 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 MEF2DQ14814 521 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 PDLIM3Q53GG5 364 aaPredicted RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 FAM53AQ6NSI3 398 aaPredicted RBP3.92□□□□□ -1.78
NEK1-204ENST00000509912 FAM71F2Q6NXP2 309 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ZNF620Q6ZNG0 422 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 ZNRF1Q8ND25 227 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 OR11H6Q8NGC7 330 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 OR8B3Q8NGG8 313 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 OR1B1Q8NGR6 318 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 OR8B2Q96RD0 313 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 SLC6A7Q99884 636 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 VPS25Q9BRG1 176 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 TMPRSS5Q9H3S3 457 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 BEX1Q9HBH7 125 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 TVP23BQ9NYZ1 205 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 DNAJC27Q9NZQ0 273 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 GNG12Q9UBI6 72 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 PPP1R3CQ9UQK1 317 aa3.92□□□□□ -1.78
NEK1-204ENST00000509912 FBLL1A6NHQ2 334 aaKnown RBP3.91□□□□□ -1.78
NEK1-204ENST00000509912 MSGN1A6NI15 193 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
NEK1-204ENST00000509912 CRYBA1P05813 215 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 CSN2P05814 226 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 CEBPGP53567 150 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 ATP1B3P54709 279 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 RAB2AP61019 212 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 ERVS71-1P61550 626 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
NEK1-204ENST00000509912 ST3GAL4Q11206 333 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 KRR1Q13601 381 aaKnown RBP3.91□□□□□ -1.78
NEK1-204ENST00000509912 KIAA1644Q3SXP7 199 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 RNASE10Q5GAN6 216 aaKnown RBP3.91□□□□□ -1.78
NEK1-204ENST00000509912 NRMQ8IXM6 262 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 RDH10Q8IZV5 341 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 STX19Q8N4C7 294 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 YIPF7Q8N8F6 280 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 GATAD1Q8WUU5 269 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 PIGCQ92535 297 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 PRO1933Q9H354 126 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 IL36GQ9NZH8 169 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 A0A1B0GVI7 797 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 CLPSL1A2RUU4 121 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 FABP12A6NFH5 140 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 MPZL1O95297 269 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 GAPDHP04406 335 aaKnown RBP3.91□□□□□ -1.78
NEK1-204ENST00000509912 TRAPPC2P0DI81 140 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 TRAPPC2BP0DI82 140 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 ZNF32P17041 273 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 S100A11P31949 105 aa3.91□□□□□ -1.78
NEK1-204ENST00000509912 ERVK11-1P61568 191 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms