RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 C1orf147Q96MC9 270 aaPredicted RBP2.57□□□□□ -2
CDC42SE2-205ENST00000502840 TECTBQ96PL2 329 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 SIGLEC12Q96PQ1 595 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 TP53RKQ96S44 253 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 SLC35B3Q9H1N7 401 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 SH3BGRL3Q9H299 93 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 LIME1Q9H400 295 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 FANCFQ9NPI8 374 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 SLC2A9Q9NRM0 540 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 DEPPQ9NTK1 212 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 SLC39A9Q9NUM3 307 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 UFSP2Q9NUQ7 469 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 TMEM100Q9NV29 134 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 GNG13Q9P2W3 67 aa2.57□□□□□ -2
CDC42SE2-205ENST00000502840 SNRNP200O75643 2136 aaKnown RBP2.57□□□□□ -2
CDC42SE2-205ENST00000502840 THADAQ6YHU6 1953 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TRBV6-7A0A0A0MS04 114 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TRGV5A0A0B4J1U4 118 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 hCG_38984A0A1B0GV85 526 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 A0A1W2PRV1 198 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 SMCO3A2RU48 225 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZNF98A6NK75 572 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 SLC22A20A6NK97 555 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZFP92A6NM28 416 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZNF716A6NP11 495 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 COLCA2A8K830 154 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 FOXI3A8MTJ6 420 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 CEBPZOSA8MTT3 80 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 DEFB108AA8MXU0 73 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 CDIPTO14735 213 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 HMGB3O15347 200 aaKnown RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 PGLYRP1O75594 196 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 EIF3GO75821 320 aaKnown RBP eCLIP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 DFFBO76075 338 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 CLDN1O95832 211 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 KRASP01116 189 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 IFNA1P01562 189 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 HBE1P02100 147 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 MT-ND4LP03901 98 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 GAPDHP04406 335 aaKnown RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 IFNA4P05014 189 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 METTL15P1P0C7V9 234 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 PSG2P11465 335 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 PAX1P15863 534 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ADCYAP1P18509 176 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 RAB5AP20339 215 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 CRYGSP22914 178 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ATP6V0CP27449 155 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 S100A2P29034 98 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 PPP1CCP36873 323 aaKnown RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 PMELP40967 661 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 GABRA2P47869 451 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 IDH3GP51553 393 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 FGF8P55075 233 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 RAB11AP62491 216 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 GNG3P63215 75 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 RUNX1Q01196 453 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZFP36L1Q07352 338 aaKnown RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZNF816Q0VGE8 651 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 FABP9Q0Z7S8 132 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 IL24Q13007 206 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZNF266Q14584 549 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 OR8B8Q15620 311 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 MSMO1Q15800 293 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TBC1D28Q2M2D7 210 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ALKBH6Q3KRA9 238 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 DCAF10Q5QP82 559 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 NCMAPQ5T1S8 102 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ATP1A1-AS1Q5TC04 95 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ASCL4Q6XD76 172 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 MMD2Q8IY49 270 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 C17orf78Q8N4C9 275 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TMEM251Q8N6I4 163 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TMEM252Q8N6L7 170 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 MAPKAPK5-AS1Q8N8E1 139 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TMEM105Q8N8V8 129 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZNF709Q8N972 641 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 UBAC2Q8NBM4 344 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 RFESDQ8TAC1 157 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 GNPNAT1Q96EK6 184 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 SDSLQ96GA7 329 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 SMIM8Q96KF7 97 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 IP6K3Q96PC2 410 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 UHRF2Q96PU4 802 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 CITED2Q99967 270 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 GINS3Q9BRX5 216 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 RTL8AQ9BWD3 113 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TTTY12Q9BZ98 90 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 TMEM222Q9H0R3 208 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 RIMS4Q9H426 269 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 NIT2Q9NQR4 276 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 MTCH1Q9NZJ7 389 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ATPIF1Q9UII2 106 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ZNF391Q9UJN7 358 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 FZR1Q9UM11 496 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 ANAPC10Q9UM13 185 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 CARHSP1Q9Y2V2 147 aaKnown RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 KLF13Q9Y2Y9 288 aaPredicted RBP2.56□□□□□ -2
CDC42SE2-205ENST00000502840 URGCP-MRPS24S4R325 110 aa2.56□□□□□ -2
CDC42SE2-205ENST00000502840 SRCAPQ6ZRS2 3230 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms