RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 IGHV1-3A0A0C4DH29 117 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 NBR2O15453 112 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 PTTG1O95997 202 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 OPN1MWP04001 364 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 FABP1P07148 127 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 OPN1MW2P0DN77 364 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 OPN1MW3P0DN78 364 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 DEFB112Q30KQ8 113 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 R3HDM4Q96D70 268 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 TMEM68Q96MH6 324 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 NAA60Q9H7X0 242 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 IGHV3-72A0A0B4J1Y9 119 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 AP4M1O00189 453 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 RBFOX2O43251 390 aaKnown RBP eCLIP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 HLA-AP01891 365 aaKnown RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 RAB11AP62491 216 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 LSAMPQ13449 338 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 TNXAQ16473 311 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 CXorf66Q5JRM2 361 aaPredicted RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 SSX9Q7RTT3 188 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 OR4A5Q8NH83 315 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 NARS2Q96I59 477 aaKnown RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 CIB3Q96Q77 187 aaPredicted RBP7.03□□□□□ -1.28
U2AF1-212ENST00000496462 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
U2AF1-212ENST00000496462 TRAV6A0A075B6T7 132 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 A0A087X0M5 115 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 SAA2-SAA4A0A096LPE2 208 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 A0A0U1RQK1 487 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 C3orf85A0A1B0GTC6 90 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 A0A1B0GX30 115 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 DUXBA0A1W2PPF3 345 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 SAA2P0DJI9 122 aaPredicted RBP7.02□□□□□ -1.28
U2AF1-212ENST00000496462 DHRS11Q6UWP2 260 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 C3orf56Q8N813 242 aa7.02□□□□□ -1.28
U2AF1-212ENST00000496462 MRPL20Q9BYC9 149 aaKnown RBP7.02□□□□□ -1.28
U2AF1-212ENST00000496462 GAR1Q9NY12 217 aaKnown RBP7.02□□□□□ -1.28
U2AF1-212ENST00000496462 WNK2Q9Y3S1 2297 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 C13orf42A0A1B0GVH6 325 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 RNASEK-C17orf49H0YIS7 233 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 C15orf65H3BRN8 121 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 OR2F2O95006 317 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 MAS1LP35410 378 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 CT45A1Q5HYN5 189 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 C12orf45Q8N5I9 185 aaPredicted RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 OR1L8Q8NGR8 309 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 OR13C8Q8NGS7 320 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 CT45A3Q8NHU0 189 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 ZFAND2BQ8WV99 257 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 FYTTD1Q96QD9 318 aaKnown RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 PLEKHA2Q9HB19 425 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 PLEKHA3Q9HB20 300 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 HEYLQ9NQ87 328 aaPredicted RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 RPS10-NUDT3A0A1W2PQS6 291 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 HAX1O00165 279 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 FGF16O43320 207 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 CD74P04233 296 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 IGHV4-38-2P0DP08 117 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 RIPPLY3P57055 190 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 RPL23AP62750 156 aaKnown RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 SLC9A3R2Q15599 337 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 TBC1D26Q86UD7 250 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 RANBP3Q9H6Z4 567 aaPredicted RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 LINC00574Q9H8X3 128 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 SLC2A9Q9NRM0 540 aa7.02□□□□□ -1.29
U2AF1-212ENST00000496462 FAM212BQ9NTI7 297 aaPredicted RBP7.02□□□□□ -1.29
U2AF1-212ENST00000496462 SSX5O60225 188 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 RPL27AP46776 148 aaKnown RBP7.01□□□□□ -1.29
U2AF1-212ENST00000496462 ASAH1Q13510 395 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 PARP11Q9NR21 331 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 GSKIPQ9P0R6 139 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 H0Y980 276 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 HMGB3O15347 200 aaKnown RBP7.01□□□□□ -1.29
U2AF1-212ENST00000496462 OR2A4O95047 310 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 KRASP01116 189 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 RND3P61587 244 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 TMEM268Q5VZI3 342 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 COMMD1Q8N668 190 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 TEX45Q8NA69 505 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 RHOVQ96L33 236 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 OR2A7Q96R45 310 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 NUDT15Q9NV35 164 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 TCF19Q9Y242 345 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 TMED3Q9Y3Q3 217 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 HOXA3O43365 443 aaPredicted RBP7.01□□□□□ -1.29
U2AF1-212ENST00000496462 SCGB1D2O95969 90 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 TCRBP04435 133 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 SULT1A3P0DMM9 295 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 SULT1A4P0DMN0 295 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 BMI1P35226 326 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 PLA2G7Q13093 441 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 ZNF660Q6AZW8 331 aaPredicted RBP7.01□□□□□ -1.29
U2AF1-212ENST00000496462 FGFRL1Q8N441 504 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 DRAXINQ8NBI3 349 aaPredicted RBP7.01□□□□□ -1.29
U2AF1-212ENST00000496462 OR4P4Q8NGL7 312 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 GRPEL2Q8TAA5 225 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 M0QZ24 198 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 DYNLT3P51808 116 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 RAB31Q13636 194 aa7.01□□□□□ -1.29
U2AF1-212ENST00000496462 RPL39P5Q59GN2 51 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms