RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SDC4P31431 198 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 S100A11P31949 105 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 DNASE1L1P49184 302 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TPI1P60174 286 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 RPS11P62280 158 aaKnown RBP eCLIP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 RANP62826 216 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 UBA52P62987 128 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PPP3R1P63098 170 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PSPHP78330 225 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 RPL19P84098 196 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TSPAN31Q12999 210 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 IL15RAQ13261 267 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 C1DQ13901 141 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 GPR176Q14439 515 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 RHEBQ15382 184 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TAF1AQ15573 450 aaPredicted RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TSNQ15631 228 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 IMPG1Q17R60 797 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 LRRC26Q2I0M4 334 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 ATP6AP1LQ52LC2 224 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PYDC2Q56P42 97 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 ACTL10Q5JWF8 245 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TMEM69Q5SWH9 247 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 C9orf64Q5T6V5 341 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 FAHD1Q6P587 224 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 DNM1P34Q6PK57 102 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 FAM131AQ6UXB0 335 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TMEM136Q6ZRR5 245 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 HIST2H3AQ71DI3 136 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 SSX6Q7RTT6 188 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PRNTQ86SH4 94 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 NAA40Q86UY6 237 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PHF13Q86YI8 300 aaPredicted RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 ZDHHC22Q8N966 263 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 C1orf64Q8NEQ6 169 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PXT1Q8NFP0 134 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 OR8J2Q8NGG1 315 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 OR5H2Q8NGV7 314 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 OR51Q1Q8NH59 317 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 C16orf78Q8WTQ4 265 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 ACOT12Q8WYK0 555 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 OR2A7Q96R45 310 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 VAT1Q99536 393 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 ACBD6Q9BR61 282 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 VPS25Q9BRG1 176 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 C7orf50Q9BRJ6 194 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 LXNQ9BS40 222 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PBDC1Q9BVG4 233 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 RAB1BQ9H0U4 201 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 OR51E2Q9H255 320 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 BOLA2Q9H3K6 86 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 NMNAT1Q9HAN9 279 aaPredicted RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 TPT1P8Q9HAU6 139 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PARP11Q9NR21 331 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 SPANXA1Q9NS26 97 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 KLF13Q9Y2Y9 288 aaPredicted RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 INSIG2Q9Y5U4 225 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PUS1Q9Y606 427 aaKnown RBP eCLIP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 VWDEQ8N2E2 1590 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 PTPRJQ12913 1337 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 MROH1Q8NDA8 1641 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 MAP3K4Q9Y6R4 1608 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 DLG5Q8TDM6 1919 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 LMO7Q8WWI1 1683 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 RGPD1P0DJD0 1748 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 XRN1Q8IZH2 1706 aaKnown RBP1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 GPR179Q6PRD1 2367 aa1.83□□□□□ -2.12
SNRNP27-204ENST00000487029 HIVEP2P31629 2446 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 C1orf167Q5SNV9 1468 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 TRPM2O94759 1503 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ADAMTS12P58397 1594 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 NWD1Q149M9 1564 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 A0A0D9SFI3 127 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 KIR2DS1A0A191URI9 304 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 KANTRA0A1W2PQU2 76 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 IRGMA1A4Y4 181 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 C9orf170A2RU37 121 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 K7ERU9 68 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 MRASO14807 208 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 TOX3O15405 576 aaPredicted RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 DLEU1O43261 78 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 MPZL2O60487 215 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 SCN2BO60939 215 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 POP7O75817 140 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ATG12O94817 140 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CXorf1O96002 111 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 IFNA21P01568 189 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 MT-ND4LP03901 98 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 PFN1P07737 140 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 UCHL1P09936 223 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 SCGB1A1P11684 91 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 UCHL3P15374 230 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CRHBPP24387 322 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 SLC6A1P30531 599 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 AGTR1P30556 359 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 MAGEA12P43365 314 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 GCLMP48507 274 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CDC34P49427 236 aaPredicted RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 XKP51811 444 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CTBP2P56545 445 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms