RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SDHAF2Q9NX18 166 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
LIMS3-203ENST00000480744 STUB1Q9UNE7 303 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 A0A087WXM4 84 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 TRAV1-2A0A0B4J238 106 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 C3orf84H3BNL1 204 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 SHOXO15266 292 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 GALP22466 123 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 MYL9P24844 172 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 FGF9P31371 208 aaPredicted RBP11.71□□□□□ -0.53
LIMS3-203ENST00000480744 LGALS7P47929 136 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 GINS4Q9BRT9 223 aa11.71□□□□□ -0.53
LIMS3-203ENST00000480744 RANGRFQ9HD47 186 aaPredicted RBP11.71□□□□□ -0.53
LIMS3-203ENST00000480744 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 A0A0B4J203 849 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 A0A0G2JLM5 398 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 H3BUA1 57 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 APELAP0DMC3 54 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 CD36P16671 472 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 ZP3P21754 424 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 TALDO1P37837 337 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 SSBP2P81877 361 aaPredicted RBP11.7□□□□□ -0.54
LIMS3-203ENST00000480744 RTL8BQ17RB0 113 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 PHB2Q99623 299 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 ZMAT4Q9H898 229 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 TNCP24821 2201 aa11.7□□□□□ -0.54
LIMS3-203ENST00000480744 IFITM5A6NNB3 132 aa11.69□□□□□ -0.54
LIMS3-203ENST00000480744 MFNGO00587 321 aa11.69□□□□□ -0.54
LIMS3-203ENST00000480744 CRYGBP07316 175 aa11.69□□□□□ -0.54
LIMS3-203ENST00000480744 HIST1H1DP16402 221 aaKnown RBP11.69□□□□□ -0.54
LIMS3-203ENST00000480744 TGFBR1P36897 503 aa11.69□□□□□ -0.54
LIMS3-203ENST00000480744 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
LIMS3-203ENST00000480744 CENPOQ9BU64 300 aa11.69□□□□□ -0.54
LIMS3-203ENST00000480744 METTL21EPA6NDL7 271 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 J3QRK9 145 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 RAB27BO00194 218 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 CLEC2LP0C7M8 214 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 RRASP10301 218 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 RAB3BP20337 219 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 RAB6AP20340 208 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 TAGLNQ01995 201 aaKnown RBP11.68□□□□□ -0.54
LIMS3-203ENST00000480744 TNXAQ16473 311 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 VMA21Q3ZAQ7 101 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 TMEM177Q53S58 311 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 MUC7Q8TAX7 377 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 TINAGL1Q9GZM7 467 aaPredicted RBP11.68□□□□□ -0.54
LIMS3-203ENST00000480744 ATG5Q9H1Y0 275 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 SSR3Q9UNL2 185 aa11.68□□□□□ -0.54
LIMS3-203ENST00000480744 LOC100506127A0A0U1RQW1 187 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 SRRM4A7MD48 611 aaKnown RBP11.67□□□□□ -0.54
LIMS3-203ENST00000480744 MPPED1O15442 326 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 DIRAS3O95661 229 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 CRYZL1O95825 349 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 SYNJ2BPP57105 145 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 IDO2Q6ZQW0 420 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 SGPP2Q8IWX5 399 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 ACOT12Q8WYK0 555 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 ADTRPQ96IZ2 230 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 TMEM68Q96MH6 324 aa11.67□□□□□ -0.54
LIMS3-203ENST00000480744 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 MSGN1A6NI15 193 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 IGHV4-30-4P0DP06 118 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 AADACP22760 399 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
LIMS3-203ENST00000480744 SDC2P34741 201 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 H1FOOQ8IZA3 346 aaPredicted RBP11.66□□□□□ -0.54
LIMS3-203ENST00000480744 OR9G4Q8NGQ1 327 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 PEF1Q9UBV8 284 aaKnown RBP11.66□□□□□ -0.54
LIMS3-203ENST00000480744 ADAM30Q9UKF2 790 aa11.66□□□□□ -0.54
LIMS3-203ENST00000480744 ELF5Q9UKW6 265 aaPredicted RBP11.66□□□□□ -0.54
LIMS3-203ENST00000480744 DNAH7Q8WXX0 4024 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 LINC00473A8K010 186 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 TRBV12-3P01733 135 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 UBE2KP61086 200 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 DYRK1AQ13627 763 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
LIMS3-203ENST00000480744 PRSS8Q16651 343 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 MRGPRG-AS1Q2M3A8 158 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 RPEL1Q2QD12 228 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 Q8N1Y9 231 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 TEX45Q8NA69 505 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 SRSF12Q8WXF0 261 aaKnown RBP11.65□□□□□ -0.54
LIMS3-203ENST00000480744 DDB2Q92466 427 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 USMG5Q96IX5 58 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 DCUN1D5Q9BTE7 237 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 PALMDQ9NP74 551 aa11.65□□□□□ -0.54
LIMS3-203ENST00000480744 ACTL6BO94805 426 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 MXD1Q05195 221 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 ARL6IP1Q15041 203 aa11.64□□□□□ -0.55
LIMS3-203ENST00000480744 TATDN3Q17R31 274 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms