RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 BVESQ8NE79 360 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 OR5AU1Q8NGC0 362 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ABHD5Q8WTS1 349 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 C15orf40Q8WUR7 153 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 FLYWCH2Q96CP2 140 aaKnown RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ADTRPQ96IZ2 230 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 CLCC1Q96S66 551 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 FBXL15Q9H469 300 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 PARP11Q9NR21 331 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 CCL28Q9NRJ3 127 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 METTL1Q9UBP6 276 aaKnown RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF107Q9UII5 783 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 A0A1W2PRX2 142 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 PSMB11A5LHX3 300 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 GABARAPH6UMI1 98 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 RRHO14718 337 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 SHOXO15266 292 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 KCNAB3O43448 404 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 SLC25A17O43808 307 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 IGHG2P01859 326 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 CD3DP04234 171 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 TNFSF8P32971 234 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 S100A5P33763 92 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 NSUN5P1Q3KNT7 163 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 FOXB2Q5VYV0 432 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 PYHIN1Q6K0P9 492 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 NPBQ8NG41 125 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 TSNAXQ99598 290 aaKnown RBP5.45□□□□□ -1.54
BRCA1-215ENST00000478531 HSD17B10Q99714 261 aaKnown RBP5.45□□□□□ -1.54
BRCA1-215ENST00000478531 WNT10AQ9GZT5 417 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 NXF2Q9GZY0 626 aaKnown RBP5.45□□□□□ -1.54
BRCA1-215ENST00000478531 FXYD6Q9H0Q3 95 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 TPSG1Q9NRR2 321 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 GAB2Q9UQC2 676 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 PRELID3BQ9Y3B1 194 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 A3GALT2U3KPV4 340 aa5.45□□□□□ -1.54
BRCA1-215ENST00000478531 FABP12A6NFH5 140 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 AP4M1O00189 453 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 NDUFA3O95167 84 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 HLA-DRB1P01911 266 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 IFNA6P05013 189 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 GNB1P62873 340 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 RPL30P62888 115 aaKnown RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 PSG5Q15238 335 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 ACTBL2Q562R1 376 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 RNASE10Q5GAN6 216 aaKnown RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF660Q6AZW8 331 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 LIN54Q6MZP7 749 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 FAAP20Q6NZ36 180 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 IDO2Q6ZQW0 420 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 STPG2Q8N412 459 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 OR4X2Q8NGF9 303 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 OR4D10Q8NGI6 311 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 OR6F1Q8NGZ6 308 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 OR51H1Q8NH63 302 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 CHPT1Q8WUD6 406 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 SMIM4Q8WVI0 70 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 DDB2Q92466 427 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 MOB3AQ96BX8 217 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 CITED2Q99967 270 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 TINAGL1Q9GZM7 467 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 MMP27Q9H306 513 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 MTFP1Q9UDX5 166 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 NOTCH3Q9UM47 2321 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 IGHV7-81A0A0B4J1V7 117 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 M0QZ24 198 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 FCN1O00602 326 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 ATP6V0E1O15342 81 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 SPDEFO95238 335 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 CA2P00918 260 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 RLN1P04808 185 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 RRASP10301 218 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 VDAC1P21796 283 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 PPP5CP53041 499 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 TAS2R19P59542 299 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 MRPS10P82664 201 aaKnown RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 NDPQ00604 133 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 ECSCRQ19T08 205 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 C2orf68Q2NKX9 166 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 SCGB2B2Q4G0G5 96 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 PYDC2Q56P42 97 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 AADACL3Q5VUY0 350 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 DHRS11Q6UWP2 260 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 MFSD4AQ8N468 514 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 OR4S2Q8NH73 311 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 SGMS2Q8NHU3 365 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 SUN5Q8TC36 379 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 WIPF2Q8TF74 440 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 DGCR14Q96DF8 476 aaKnown RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 RNF5Q99942 180 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 FAM103A1Q9BTL3 118 aaKnown RBP5.44□□□□□ -1.54
BRCA1-215ENST00000478531 NDUFA13Q9P0J0 144 aa5.44□□□□□ -1.54
BRCA1-215ENST00000478531 TCRBV4S1A1TA0A5B7 111 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 SRRM4A7MD48 611 aaKnown RBP5.43□□□□□ -1.54
BRCA1-215ENST00000478531 G3V318 75 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 RAMP3O60896 148 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 CNIH1O95406 144 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 TSPAN15O95858 294 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 IGLV2-23P01705 113 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 CSF1P09603 554 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms