RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ADAM30Q9UKF2 790 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 TRBV6-7A0A0A0MS04 114 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 SRRM4A7MD48 611 aaKnown RBP16.08■□□□□ 0.16
COL9A3-207ENST00000467819 TRBV12-3P01733 135 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 GNB3P16520 340 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 AADACP22760 399 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 RANBP1P43487 201 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 TMEM177Q53S58 311 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 TMEM68Q96MH6 324 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 GINS4Q9BRT9 223 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 ACOT13Q9NPJ3 140 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 PEF1Q9UBV8 284 aaKnown RBP16.08■□□□□ 0.16
COL9A3-207ENST00000467819 STARD9Q9P2P6 4700 aa16.08■□□□□ 0.16
COL9A3-207ENST00000467819 LYSTQ99698 3801 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 GADD45AP24522 165 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 PSMD7P51665 324 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 OR10A3P58181 314 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 DYRK1AQ13627 763 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 IL34Q6ZMJ4 242 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 OR10R2Q8NGX6 335 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 NRG4Q8WWG1 115 aa16.07■□□□□ 0.16
COL9A3-207ENST00000467819 MSGN1A6NI15 193 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 A8MZ25 164 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 H0Y980 276 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 MFNGO00587 321 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 TAGLNQ01995 201 aaKnown RBP16.06■□□□□ 0.16
COL9A3-207ENST00000467819 TNXAQ16473 311 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 MRGPRG-AS1Q2M3A8 158 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 VMA21Q3ZAQ7 101 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 ZNF343Q6P1L6 599 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 IDO2Q6ZQW0 420 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 PRSS48Q7RTY5 328 aa16.06■□□□□ 0.16
COL9A3-207ENST00000467819 PDCD5O14737 125 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 RBMXL2O75526 392 aaKnown RBP16.05■□□□□ 0.16
COL9A3-207ENST00000467819 BRI3O95415 125 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 CRYZL1O95825 349 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 RRASP10301 218 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 HIST1H1DP16402 221 aaKnown RBP16.05■□□□□ 0.16
COL9A3-207ENST00000467819 CRHBPP24387 322 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 RPEL1Q2QD12 228 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 ISOC1Q96CN7 298 aa16.05■□□□□ 0.16
COL9A3-207ENST00000467819 A0A0B4J203 849 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 SHISA3A0PJX4 238 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 MPPED1O15442 326 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 DIRAS3O95661 229 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 CSN3P07498 182 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 DUTP33316 252 aaKnown RBP16.04■□□□□ 0.16
COL9A3-207ENST00000467819 TALDO1P37837 337 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 UBE2KP61086 200 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 ARFRP1Q13795 201 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 PRSS8Q16651 343 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 TATDN3Q17R31 274 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 ADAD2Q8NCV1 583 aaKnown RBP16.04■□□□□ 0.16
COL9A3-207ENST00000467819 ACOT12Q8WYK0 555 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 DDB2Q92466 427 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 USMG5Q96IX5 58 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 ADTRPQ96IZ2 230 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 EDA2RQ9HAV5 297 aa16.04■□□□□ 0.16
COL9A3-207ENST00000467819 IFITM5A6NNB3 132 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 LINC00473A8K010 186 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 J3QRK9 145 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 RAB27BO00194 218 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 OR9G9P0C7N8 305 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 MYL9P24844 172 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 SSX1Q16384 188 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 LCN12Q6JVE5 192 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 GTSCR1Q86UQ5 136 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 TEX45Q8NA69 505 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 SRSF12Q8WXF0 261 aaKnown RBP16.03■□□□□ 0.16
COL9A3-207ENST00000467819 SPATA25Q9BR10 227 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 DNAH1Q9P2D7 4330 aa16.03■□□□□ 0.16
COL9A3-207ENST00000467819 IGKV1D-8A0A087WSZ0 117 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 LCE6AA0A183 80 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 IZUMO1RA6ND01 250 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 PRH1P02810 166 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 RAB6AP20340 208 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 TBCEQ15813 527 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-207ENST00000467819 HAGHQ16775 308 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 H1FOOQ8IZA3 346 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-207ENST00000467819 SNAPC3Q92966 411 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 TUBA4BQ9H853 241 aa16.02■□□□□ 0.16
COL9A3-207ENST00000467819 ELF5Q9UKW6 265 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-207ENST00000467819 TRAV1-2A0A0B4J238 106 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 METTL21EPA6NDL7 271 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 OR2A4O95047 310 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 RAB3BP20337 219 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 RHOGP84095 191 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 EXOSC2Q13868 293 aaKnown RBP16.01■□□□□ 0.15
COL9A3-207ENST00000467819 ZNF367Q7RTV3 350 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 Q8N402 240 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 THAP7Q9BT49 309 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-207ENST00000467819 ZNF430Q9H8G1 570 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-207ENST00000467819 AKIP1Q9NQ31 210 aa16.01■□□□□ 0.15
COL9A3-207ENST00000467819 SAA1P0DJI8 122 aaPredicted RBP16■□□□□ 0.15
COL9A3-207ENST00000467819 OSR1Q8TAX0 266 aaPredicted RBP16■□□□□ 0.15
COL9A3-207ENST00000467819 DCUN1D5Q9BTE7 237 aa16■□□□□ 0.15
COL9A3-207ENST00000467819 ATG5Q9H1Y0 275 aa16■□□□□ 0.15
COL9A3-207ENST00000467819 SIGLEC8Q9NYZ4 499 aa16■□□□□ 0.15
COL9A3-207ENST00000467819 PEMTQ9UBM1 199 aa16■□□□□ 0.15
COL9A3-207ENST00000467819 SMIM30A4D0T7 59 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms