RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 RAMP3O60896 148 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 CTRLP40313 264 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 WNT5AP41221 380 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 CST9LP1Q5W188 147 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 SLC23A3Q6PIS1 610 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 H2BFWTQ7Z2G1 175 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
CHD1L-205ENST00000467213 HES4Q9HCC6 221 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 A8MXE2 369 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 CCNOP22674 350 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 TGFBR3Q03167 851 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 GABRA6Q16445 453 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 WDR73Q6P4I2 378 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF114Q8NC26 417 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 SAP25Q8TEE9 199 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 RHBDL1O75783 438 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 NEURL1O76050 574 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 S1PR2O95136 353 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 FOLR3P41439 243 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 RPL30P62888 115 aaKnown RBP13.01□□□□□ -0.33
CHD1L-205ENST00000467213 ARSJQ5FYB0 599 aaPredicted RBP13.01□□□□□ -0.33
CHD1L-205ENST00000467213 TIPARPQ7Z3E1 657 aaKnown RBP13.01□□□□□ -0.33
CHD1L-205ENST00000467213 SPEM1Q8N4L4 309 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 C5orf30Q96GV9 206 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 MSL2Q9HCI7 577 aa13.01□□□□□ -0.33
CHD1L-205ENST00000467213 SERF1AO75920 110 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 NPSP0C0P6 89 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 OCC1Q8TAD7 63 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 HSPB9Q9BQS6 159 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 SFXN3Q9BWM7 321 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 BOKQ9UMX3 212 aaPredicted RBP13□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF503-AS2A6NEH8 195 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 PRSS46E5RG02 174 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 MT-CO2P00403 227 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 PRR7Q8TB68 274 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 OR2D2Q9H210 308 aa13□□□□□ -0.33
CHD1L-205ENST00000467213 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
CHD1L-205ENST00000467213 GPX1P07203 203 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF90Q03938 601 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 FNDC10F2Z333 226 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 PLGLB1Q02325 96 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF766Q5HY98 468 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 SPATA46Q5T0L3 261 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 C1orf174Q8IYL3 243 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 Q8N976 141 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 SCCPDHQ8NBX0 429 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF586Q9NXT0 402 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 GTF3C1Q12789 2109 aa12.99□□□□□ -0.33
CHD1L-205ENST00000467213 SIRPB1O00241 398 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 TRAPPC6AO75865 159 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 CRYAAP02489 173 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 GDF1P27539 372 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 WFIKKN1Q96NZ8 548 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 A0A096LPE4 126 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 TRAV39A0A0B4J263 110 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 A0A1W2PPZ6 126 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 C17orf98A8MV24 154 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 CCL2P13500 99 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 OR1C1Q15619 314 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 RPEL1Q2QD12 228 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 FBXW9Q5XUX1 488 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 TRAT1Q6PIZ9 186 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 NANOS1Q8WY41 292 aaKnown RBP12.98□□□□□ -0.33
CHD1L-205ENST00000467213 ZDHHC16Q969W1 377 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 APH1AQ96BI3 265 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
CHD1L-205ENST00000467213 DEPPQ9NTK1 212 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 IFNL4K9M1U5 179 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 ARL14EPLP0DKL9 152 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 CLDN18P56856 261 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 TREML4Q6UXN2 200 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 WDR86Q86TI4 376 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF784Q8NCA9 323 aaPredicted RBP12.98□□□□□ -0.33
CHD1L-205ENST00000467213 UHRF2Q96PU4 802 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 PATZ1Q9HBE1 687 aaKnown RBP12.98□□□□□ -0.33
CHD1L-205ENST00000467213 UQCR10Q9UDW1 63 aa12.98□□□□□ -0.33
CHD1L-205ENST00000467213 LSM4Q9Y4Z0 139 aaKnown RBP12.98□□□□□ -0.33
CHD1L-205ENST00000467213 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 NTN3O00634 580 aaPredicted RBP12.97□□□□□ -0.33
CHD1L-205ENST00000467213 CA6P23280 308 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 ZNF816Q0VGE8 651 aaPredicted RBP12.97□□□□□ -0.33
CHD1L-205ENST00000467213 ANKRD39Q53RE8 183 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 SIGLECL1Q8N7X8 197 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 OR5T1Q8NG75 326 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 OR1L6Q8NGR2 347 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 ORAOV1Q8WV07 137 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 GGTLC1Q9BX51 225 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 TRAV38-1A0A0B4J264 116 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 OR5G3P0C626 314 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 PRR18Q8N4B5 295 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 SLC25A10Q9UBX3 287 aaPredicted RBP12.97□□□□□ -0.33
CHD1L-205ENST00000467213 PTPRBP23467 1997 aa12.97□□□□□ -0.33
CHD1L-205ENST00000467213 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms