RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 LY6LH3BQJ8 138 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 CASQ2O14958 399 aaPredicted RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 FGF16O43320 207 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 KCNAB3O43448 404 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 MMP23AO75900 390 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 CDRT1O95170 752 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 GAPDHP04406 335 aaKnown RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 CGB3P0DN86 165 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 CGB7P0DN87 165 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 GP9P14770 177 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 IGFBP3P17936 291 aaPredicted RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 SERPINA2P20848 420 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 OR3A4PP47883 348 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 ADARB1P78563 741 aaKnown RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 LRRC36Q1X8D7 754 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 PIGYQ3MUY2 71 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 SLC22A6Q4U2R8 563 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 LDLRAD2Q5SZI1 272 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 KPRPQ5T749 579 aaPredicted RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 OGFRL1Q5TC84 451 aaPredicted RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 JAGN1Q8N5M9 183 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 LINC00311Q8N616 119 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 COMMD1Q8N668 190 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 MAPKAPK5-AS1Q8N8E1 139 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 SUMF2Q8NBJ7 301 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 ZNF485Q8NCK3 441 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 OR5AU1Q8NGC0 362 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 OR13A1Q8NGR1 328 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 MRGPRDQ8TDS7 321 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 NEK7Q8TDX7 302 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 RGP1Q92546 391 aaPredicted RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 MYDGFQ969H8 173 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 PGLYRP3Q96LB9 341 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 MND1Q9BWT6 205 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 VCX3BQ9H321 246 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 SCN3BQ9NY72 215 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 ZMAT5Q9UDW3 170 aaKnown RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 ING4Q9UNL4 249 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 PSG11Q9UQ72 335 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 MRPS28Q9Y2Q9 187 aaKnown RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 SIGLEC9Q9Y336 463 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 LRRC42Q9Y546 428 aa5.08□□□□□ -1.6
TPM3-214ENST00000466010 TSSC4Q9Y5U2 329 aaPredicted RBP5.08□□□□□ -1.6
TPM3-214ENST00000466010 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 AIPO00170 330 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 SDCBPO00560 298 aaPredicted RBP5.07□□□□□ -1.6
TPM3-214ENST00000466010 HSD17B6O14756 317 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 GEMIN2O14893 280 aaKnown RBP5.07□□□□□ -1.6
TPM3-214ENST00000466010 CD28P10747 220 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 CELP19835 753 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 FUT3P21217 361 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 PSMA1P25786 263 aaKnown RBP5.07□□□□□ -1.6
TPM3-214ENST00000466010 PAX6P26367 422 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 HOXA1P49639 335 aaPredicted RBP5.07□□□□□ -1.6
TPM3-214ENST00000466010 BLCAPP62952 87 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 SLC35A2P78381 396 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 SLC35B1P78383 322 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ZNF816Q0VGE8 651 aaPredicted RBP5.07□□□□□ -1.6
TPM3-214ENST00000466010 HES1Q14469 280 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 TRAM1Q15629 374 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ZNF260Q3ZCT1 412 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ABCA11PQ4W5N1 156 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ATAD3CQ5T2N8 411 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 GLT8D1Q68CQ7 371 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 AWAT2Q6E213 333 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 XAF1Q6GPH4 301 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ZNF497Q6ZNH5 498 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 AHSA2Q719I0 299 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ERASQ7Z444 233 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 OR51D1Q8NGF3 324 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 OR10K1Q8NGX5 313 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 ARL11Q969Q4 196 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 MRPL53Q96EL3 112 aaKnown RBP5.07□□□□□ -1.6
TPM3-214ENST00000466010 DERL3Q96Q80 235 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 KCNIP1Q9NZI2 227 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 CLEC2DQ9UHP7 191 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 TRAPPC2LQ9UL33 140 aa5.07□□□□□ -1.6
TPM3-214ENST00000466010 NOTCH3Q9UM47 2321 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 TCRBV4S1A1TA0A5B7 111 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 FAM172BPA6NC97 362 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 H0Y8G0 127 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 CCSO14618 274 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 CRTAPO75718 401 aaPredicted RBP5.06□□□□□ -1.6
TPM3-214ENST00000466010 SC5DO75845 299 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 MT-ND4P03905 459 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 MGMTP16455 207 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 CD1BP29016 333 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 SSTR5P35346 364 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 HSPA13P48723 471 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 ZNF137PP52743 207 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 RPS11P62280 158 aaKnown RBP eCLIP5.06□□□□□ -1.6
TPM3-214ENST00000466010 EBI3Q14213 229 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 MEF2DQ14814 521 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 TWIST1Q15672 202 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 TATDN3Q17R31 274 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 NSUN5P1Q3KNT7 163 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 ANKRD55Q3KP44 614 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 LIPKQ5VXJ0 399 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 GLIPR1L1Q6UWM5 242 aa5.06□□□□□ -1.6
TPM3-214ENST00000466010 TGIF2LXQ8IUE1 241 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms