RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 FAM231DQ6ZW35 169 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 OSR1Q8TAX0 266 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 TM4SF19Q96DZ7 209 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 SPATA25Q9BR10 227 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 PRTFDC1Q9NRG1 225 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 CUL7Q14999 1698 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 C3orf85A0A1B0GTC6 90 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 LILRA1O75019 489 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 UPK3AO75631 287 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 IGHV3-7P01780 117 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 PSG2P11465 335 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 LYL1P12980 280 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 CST5P28325 142 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 RPL31P62899 125 aaKnown RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 CCL20P78556 96 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 FOXI1Q12951 378 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 KLF17Q5JT82 389 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 C1orf220Q5T0J3 134 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 RFLNAQ6ZTI6 216 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 PHRF1Q9P1Y6 1649 aaKnown RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 PTPRMP28827 1452 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 DIDO1Q9BTC0 2240 aaKnown RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 A0A1B0GUS0 222 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 NPIPB15A6NHN6 443 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 C1QAP02745 245 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 RPL35AP18077 110 aaKnown RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 HERVK_113P63121 156 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 RAE1P78406 368 aaKnown RBP4.79□□□□□ -1.64
PTPRC-209ENST00000442510 PRSS53Q2L4Q9 553 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 NRN1LQ496H8 165 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 CT83Q5H943 113 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 TM4SF18Q96CE8 201 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 NEURL3Q96EH8 262 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 TMEM167BQ9NRX6 74 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 CACNG5Q9UF02 275 aa4.79□□□□□ -1.64
PTPRC-209ENST00000442510 TRBV6-7A0A0A0MS04 114 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SHISA3A0PJX4 238 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 H3BML4 177 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SYS1-DBNDD2H3BUS1 97 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 RBM3P98179 157 aaKnown RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 LYZL2Q7Z4W2 148 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 HOGA1Q86XE5 327 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SCAMP5Q8TAC9 235 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 PLD4Q96BZ4 506 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SHISA4Q96DD7 197 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 RPRMQ9NS64 109 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 TCF19Q9Y242 345 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 MROH1Q8NDA8 1641 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 NUP214P35658 2090 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 HMGN2P05204 90 aaKnown RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 VDAC1P21796 283 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 RPL30P62888 115 aaKnown RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 UNQ9370/PRO34162Q6UXP9 181 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 CFHR5Q9BXR6 569 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 AICDAQ9GZX7 198 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 IL36RNQ9UBH0 155 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 TAC3Q9UHF0 121 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 RFNGQ9Y644 331 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SLIT3O75094 1523 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 LOC107986453A0A1B0GWG9 222 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 C5orf49A4QMS7 147 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 PGPA6NDG6 321 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 FAM157AC9JC47 383 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 B3GALT4O96024 378 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SELPP16109 830 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 FOXA3P55318 350 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 ZNF260Q3ZCT1 412 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 FBXL14Q8N1E6 418 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 COA3Q9Y2R0 106 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SNRNP200O75643 2136 aaKnown RBP4.78□□□□□ -1.64
PTPRC-209ENST00000442510 LOC102723996A0A087X1L8 192 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 SLC25A53Q5H9E4 307 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 PRSS41Q7RTY9 318 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 C20orf78Q9BR46 151 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 QRICH2Q9H0J4 1663 aa4.78□□□□□ -1.64
PTPRC-209ENST00000442510 H0YIZ8 118 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 CDX4O14627 284 aaPredicted RBP4.77□□□□□ -1.65
PTPRC-209ENST00000442510 UQCRQO14949 82 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 RPS11P62280 158 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRC-209ENST00000442510 RPS4XP62701 263 aaKnown RBP4.77□□□□□ -1.65
PTPRC-209ENST00000442510 RPL8P62917 257 aaKnown RBP4.77□□□□□ -1.65
PTPRC-209ENST00000442510 NEXMIFQ5QGS0 1516 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 C1orf53Q5VUE5 145 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 MOB3BQ86TA1 216 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 GATD1Q8NB37 220 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 CHCHD1Q96BP2 118 aaKnown RBP4.77□□□□□ -1.65
PTPRC-209ENST00000442510 Q96M85 177 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 NRTNQ99748 197 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 CLDND1Q9NY35 253 aa4.77□□□□□ -1.65
PTPRC-209ENST00000442510 ZNFX1Q9P2E3 1918 aaKnown RBP4.77□□□□□ -1.65
PTPRC-209ENST00000442510 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms