RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TPBGQ13641 420 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 RAB11BQ15907 218 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 LIPKQ5VXJ0 399 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 LAX1Q8IWV1 398 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 UFD1Q92890 307 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 TMEM203Q969S6 136 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 FAM3DQ96BQ1 224 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 KRTAP4-6Q9BYQ5 205 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 PLGRKTQ9HBL7 147 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 NKX1-2Q9UD57 310 aaPredicted RBP8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
SPTLC1P4-201ENST00000435997 TMEM272A0A1B0GTI8 110 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 SHISA3A0PJX4 238 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 FAM223BA6NKX1 122 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 EBAG9O00559 213 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 MFNGO00587 321 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 IFNA6P05013 189 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 OR9G9P0C7N8 305 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 DUTP33316 252 aaKnown RBP8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 CLDN12P56749 244 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 RPS25P62851 125 aaKnown RBP8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 MED22Q15528 200 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 PRSS8Q16651 343 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 RTL8BQ17RB0 113 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 RPEL1Q2QD12 228 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 IGSF11Q5DX21 431 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 FAM223AQ8IWN6 122 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 TEX45Q8NA69 505 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 OR56B1Q8NGI3 324 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 SRSF12Q8WXF0 261 aaKnown RBP8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 RETNQ9HD89 108 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 CEPT1Q9Y6K0 416 aa8.28□□□□□ -1.08
SPTLC1P4-201ENST00000435997 TNCP24821 2201 aa8.27□□□□□ -1.08
SPTLC1P4-201ENST00000435997 MSGN1A6NI15 193 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RAB27BO00194 218 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 SHOXO15266 292 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 AIREO43918 545 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 ARL6IP5O75915 188 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 GSTT2P0CG29 244 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 GSTT2BP0CG30 244 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 APELAP0DMC3 54 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RRASP10301 218 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 PSMA1P25786 263 aaKnown RBP8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RHOGP84095 191 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 MLLT11Q13015 90 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 C2orf76Q3KRA6 126 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 Q6ZS49 121 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 H1FOOQ8IZA3 346 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 SNAPC3Q92966 411 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 DUSP21Q9H596 190 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 TUBA4BQ9H853 241 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 PLEKHA3Q9HB20 300 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 AKIP1Q9NQ31 210 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 COA4Q9NYJ1 87 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 PEMTQ9UBM1 199 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 DMRT1Q9Y5R6 373 aa8.27□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 A0A0B4J203 849 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 LINC00473A8K010 186 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 PTGES3LE9PB15 166 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 BET1O15155 118 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 DENRO43583 198 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 HIST1H1DP16402 221 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 CALRP27797 417 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 CD81P60033 236 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 FABP5Q01469 135 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 CBX3Q13185 183 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 EXOSC2Q13868 293 aaKnown RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 TRAM1Q15629 374 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 TATDN3Q17R31 274 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 VMA21Q3ZAQ7 101 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 IDO2Q6ZQW0 420 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 OR10J5Q8NHC4 309 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 OSR1Q8TAX0 266 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RAB3CQ96E17 227 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 ADTRPQ96IZ2 230 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 FAM110AQ9BQ89 295 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 ZNF430Q9H8G1 570 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 V9GY05 133 aa8.26□□□□□ -1.09
SPTLC1P4-201ENST00000435997 IGKV1D-8A0A087WSZ0 117 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 JTBO76095 146 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 CRYZL1O95825 349 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 IGLV2-14P01704 120 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 PRH1P02810 166 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 CD7P09564 240 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 SAA1P0DJI8 122 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 RANBP1P43487 201 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 TNXAQ16473 311 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 FAM209BQ5JX69 171 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 TTC9CQ8N5M4 171 aa8.25□□□□□ -1.09
SPTLC1P4-201ENST00000435997 OR10R2Q8NGX6 335 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms