RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ANKRD65E5RJM6 399 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 MFNGO00587 321 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 PDCD5O14737 125 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 BRI3O95415 125 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 GNB3P16520 340 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 CRHBPP24387 322 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 MAP2K4P45985 399 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 KLF5Q13887 457 aaPredicted RBP13.21□□□□□ -0.29
PTCD1-202ENST00000419981 NRG4Q8WWG1 115 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 MAFIPQ8WZ33 124 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 GINS4Q9BRT9 223 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
PTCD1-202ENST00000419981 PEF1Q9UBV8 284 aaKnown RBP13.21□□□□□ -0.29
PTCD1-202ENST00000419981 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.29
PTCD1-202ENST00000419981 SRRM4A7MD48 611 aaKnown RBP13.2□□□□□ -0.3
PTCD1-202ENST00000419981 H0Y980 276 aa13.2□□□□□ -0.3
PTCD1-202ENST00000419981 HIST1H1DP16402 221 aaKnown RBP13.2□□□□□ -0.3
PTCD1-202ENST00000419981 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
PTCD1-202ENST00000419981 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
PTCD1-202ENST00000419981 ZNF343Q6P1L6 599 aa13.2□□□□□ -0.3
PTCD1-202ENST00000419981 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
PTCD1-202ENST00000419981 ADTRPQ96IZ2 230 aa13.2□□□□□ -0.3
PTCD1-202ENST00000419981 APELAP0DMC3 54 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 RAB6AP20340 208 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 MYL9P24844 172 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 OR10A3P58181 314 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 DYRK1AQ13627 763 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 ARFRP1Q13795 201 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 TBCEQ15813 527 aaPredicted RBP13.19□□□□□ -0.3
PTCD1-202ENST00000419981 TNXAQ16473 311 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 RPEL1Q2QD12 228 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 TEX45Q8NA69 505 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 ISOC1Q96CN7 298 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 CENPOQ9BU64 300 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 ADAM30Q9UKF2 790 aa13.19□□□□□ -0.3
PTCD1-202ENST00000419981 TRAV1-2A0A0B4J238 106 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 IFITM5A6NNB3 132 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 RAB27BO00194 218 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 MPPED1O15442 326 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 CRYZL1O95825 349 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 DUTP33316 252 aaKnown RBP13.18□□□□□ -0.3
PTCD1-202ENST00000419981 TALDO1P37837 337 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 UBE2KP61086 200 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 SSX1Q16384 188 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 MRGPRG-AS1Q2M3A8 158 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 IL34Q6ZMJ4 242 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 IDO2Q6ZQW0 420 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 ZNF367Q7RTV3 350 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 GTSCR1Q86UQ5 136 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
PTCD1-202ENST00000419981 ADAD2Q8NCV1 583 aaKnown RBP13.18□□□□□ -0.3
PTCD1-202ENST00000419981 SRSF12Q8WXF0 261 aaKnown RBP13.18□□□□□ -0.3
PTCD1-202ENST00000419981 ACOT12Q8WYK0 555 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 DDB2Q92466 427 aa13.18□□□□□ -0.3
PTCD1-202ENST00000419981 SHISA3A0PJX4 238 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 CSN3P07498 182 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 RAB3BP20337 219 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 PRSS8Q16651 343 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 Q6ZS49 121 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 OSR1Q8TAX0 266 aaPredicted RBP13.17□□□□□ -0.3
PTCD1-202ENST00000419981 SPATA25Q9BR10 227 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 SIGLEC8Q9NYZ4 499 aa13.17□□□□□ -0.3
PTCD1-202ENST00000419981 A0A0B4J203 849 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 LINC00473A8K010 186 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 CREBL2O60519 120 aaPredicted RBP13.16□□□□□ -0.3
PTCD1-202ENST00000419981 OR2A4O95047 310 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 ZFAND6Q6FIF0 208 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 Q8N402 240 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 SNAPC3Q92966 411 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 EDA2RQ9HAV5 297 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 NDUFB11Q9NX14 153 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 BLOC1S6Q9UL45 172 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 TENM2Q9NT68 2774 aa13.16□□□□□ -0.3
PTCD1-202ENST00000419981 IGKV1D-8A0A087WSZ0 117 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 FAM223BA6NKX1 122 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 RBMXL2O75526 392 aaKnown RBP13.15□□□□□ -0.3
PTCD1-202ENST00000419981 DTYMKP23919 212 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.3
PTCD1-202ENST00000419981 ARL6IP1Q15041 203 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 CDK10Q15131 360 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 FAM223AQ8IWN6 122 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 ZNF645Q8N7E2 425 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 THAP7Q9BT49 309 aaPredicted RBP13.15□□□□□ -0.3
PTCD1-202ENST00000419981 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 VCX3BQ9H321 246 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
PTCD1-202ENST00000419981 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
PTCD1-202ENST00000419981 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 LCE6AA0A183 80 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 TRDV1A0A1B0GX56 115 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 ACTL6BO94805 426 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
PTCD1-202ENST00000419981 RHOGP84095 191 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms