RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ACOT13Q9NPJ3 140 aa11.02□□□□□ -0.65
PAF1-202ENST00000416728 LCE6AA0A183 80 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 ERICH4A6NGS2 130 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
PAF1-202ENST00000416728 APELAP0DMC3 54 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 RRASP10301 218 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 AQP4P55087 323 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 DYRK1AQ13627 763 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 RPEL1Q2QD12 228 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 VMA21Q3ZAQ7 101 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 IL34Q6ZMJ4 242 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 GTSCR1Q86UQ5 136 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 OR10R2Q8NGX6 335 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 MAFIPQ8WZ33 124 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 C5orf30Q96GV9 206 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 SPATA25Q9BR10 227 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 GINS4Q9BRT9 223 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
PAF1-202ENST00000416728 TENM2Q9NT68 2774 aa11□□□□□ -0.65
PAF1-202ENST00000416728 A0A075B6Q4 140 aa11□□□□□ -0.65
PAF1-202ENST00000416728 MSGN1A6NI15 193 aa11□□□□□ -0.65
PAF1-202ENST00000416728 MFNGO00587 321 aa11□□□□□ -0.65
PAF1-202ENST00000416728 PDCD5O14737 125 aa11□□□□□ -0.65
PAF1-202ENST00000416728 MPPED1O15442 326 aa11□□□□□ -0.65
PAF1-202ENST00000416728 TRBV12-3P01733 135 aa11□□□□□ -0.65
PAF1-202ENST00000416728 GNB3P16520 340 aa11□□□□□ -0.65
PAF1-202ENST00000416728 UBE2KP61086 200 aa11□□□□□ -0.65
PAF1-202ENST00000416728 TNXAQ16473 311 aa11□□□□□ -0.65
PAF1-202ENST00000416728 PRSS48Q7RTY5 328 aa11□□□□□ -0.65
PAF1-202ENST00000416728 Q8N402 240 aa11□□□□□ -0.65
PAF1-202ENST00000416728 TEX45Q8NA69 505 aa11□□□□□ -0.65
PAF1-202ENST00000416728 ADAD2Q8NCV1 583 aaKnown RBP11□□□□□ -0.65
PAF1-202ENST00000416728 ADTRPQ96IZ2 230 aa11□□□□□ -0.65
PAF1-202ENST00000416728 TUBA4BQ9H853 241 aa11□□□□□ -0.65
PAF1-202ENST00000416728 GAR1Q9NY12 217 aaKnown RBP11□□□□□ -0.65
PAF1-202ENST00000416728 SIGLEC8Q9NYZ4 499 aa11□□□□□ -0.65
PAF1-202ENST00000416728 ZNF230Q9UIE0 474 aaPredicted RBP11□□□□□ -0.65
PAF1-202ENST00000416728 ADAM30Q9UKF2 790 aa11□□□□□ -0.65
PAF1-202ENST00000416728 A0A0B4J203 849 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 OR2A4O95047 310 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 CRYZL1O95825 349 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 CSN3P07498 182 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 OR9G9P0C7N8 305 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 HIST1H1DP16402 221 aaKnown RBP10.99□□□□□ -0.65
PAF1-202ENST00000416728 TALDO1P37837 337 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 MAP2K4P45985 399 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 PRSS8Q16651 343 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 HAGHQ16775 308 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 MRGPRG-AS1Q2M3A8 158 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 IDO2Q6ZQW0 420 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 SRSF12Q8WXF0 261 aaKnown RBP10.99□□□□□ -0.65
PAF1-202ENST00000416728 ACOT12Q8WYK0 555 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 SNAPC3Q92966 411 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 CENPOQ9BU64 300 aa10.99□□□□□ -0.65
PAF1-202ENST00000416728 NKX1-2Q9UD57 310 aaPredicted RBP10.99□□□□□ -0.65
PAF1-202ENST00000416728 RYR2Q92736 4967 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 ANKRD65E5RJM6 399 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 RAB27BO00194 218 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 CRHBPP24387 322 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 DUTP33316 252 aaKnown RBP10.98□□□□□ -0.65
PAF1-202ENST00000416728 OR10A3P58181 314 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 ARFRP1Q13795 201 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 H1FOOQ8IZA3 346 aaPredicted RBP10.98□□□□□ -0.65
PAF1-202ENST00000416728 OSR1Q8TAX0 266 aaPredicted RBP10.98□□□□□ -0.65
PAF1-202ENST00000416728 DDB2Q92466 427 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 THAP7Q9BT49 309 aaPredicted RBP10.98□□□□□ -0.65
PAF1-202ENST00000416728 PEMTQ9UBM1 199 aa10.98□□□□□ -0.65
PAF1-202ENST00000416728 TRAV1-2A0A0B4J238 106 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 METTL21EPA6NDL7 271 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 FAM223BA6NKX1 122 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
PAF1-202ENST00000416728 RBMXL2O75526 392 aaKnown RBP10.97□□□□□ -0.65
PAF1-202ENST00000416728 ACTL6BO94805 426 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 IFNA6P05013 189 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 RAB6AP20340 208 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 MYL9P24844 172 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 RHOGP84095 191 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 EXOSC2Q13868 293 aaKnown RBP10.97□□□□□ -0.65
PAF1-202ENST00000416728 FAM223AQ8IWN6 122 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 AKIP1Q9NQ31 210 aa10.97□□□□□ -0.65
PAF1-202ENST00000416728 IZUMO1RA6ND01 250 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 LINC00473A8K010 186 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 AIREO43918 545 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 PRH1P02810 166 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 SAA1P0DJI8 122 aaPredicted RBP10.96□□□□□ -0.65
PAF1-202ENST00000416728 ATP5G2Q06055 141 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 TBCEQ15813 527 aaPredicted RBP10.96□□□□□ -0.65
PAF1-202ENST00000416728 Q6ZS49 121 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 ZNF367Q7RTV3 350 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 NRG4Q8WWG1 115 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 SPIN2AQ99865 258 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 SPIN2BQ9BPZ2 258 aa10.96□□□□□ -0.65
PAF1-202ENST00000416728 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.65
PAF1-202ENST00000416728 DNAH7Q8WXX0 4024 aa10.96□□□□□ -0.66
PAF1-202ENST00000416728 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.66
PAF1-202ENST00000416728 IGKV1D-8A0A087WSZ0 117 aa10.95□□□□□ -0.66
PAF1-202ENST00000416728 SHISA3A0PJX4 238 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms