RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 PYHIN1Q6K0P9 492 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 LIN54Q6MZP7 749 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 FAM131AQ6UXB0 335 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 C18orf65Q6ZTR6 163 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 PDPNQ86YL7 162 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 ZNF491Q8N8L2 437 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 OR5M8Q8NGP6 311 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 IL1F10Q8WWZ1 152 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 FCGR1BQ92637 280 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 ARHGAP5-AS1Q96IT6 56 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 CMSS1Q9BQ75 279 aaKnown RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 PECRQ9BY49 303 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 YTHDF1Q9BYJ9 559 aaKnown RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 CCDC90BQ9GZT6 254 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 CHMP1AQ9HD42 196 aaPredicted RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 KIAA1456Q9P272 454 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 LINC00527Q9UJ94 153 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 RAB22AQ9UL26 194 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 WASHC3Q9Y3C0 194 aa4.76□□□□□ -1.65
PTPN20-208ENST00000395727 AK6Q9Y3D8 172 aaKnown RBP4.76□□□□□ -1.65
PTPN20-208ENST00000395727 TRBV6-7A0A0A0MS04 114 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 IGKV1-6A0A0C4DH72 117 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 TMEM272A0A1B0GTI8 110 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 TRDCB7Z8K6 153 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 H3BUA1 57 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 RAB27BO00194 218 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 HSPA12AO43301 675 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 SCGNO76038 276 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 TFAP2AP05549 437 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 FCGR3AP08637 254 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 SCTP09683 121 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 OR8U8P0C7N1 319 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 SLC2A2P11168 524 aaPredicted RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 HIST1H1DP16402 221 aaKnown RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 RAB3BP20337 219 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 DTYMKP23919 212 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 GADD45AP24522 165 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 MYL9P24844 172 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 CNTFRP26992 372 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 CEACAM6P40199 344 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 MAP2K4P45985 399 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 VEGFCP49767 419 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 CX3CL1P78423 397 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 NDPQ00604 133 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 RAB32Q13637 225 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 ZNF562Q6V9R5 426 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 OR10R2Q8NGX6 335 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 RAB3CQ96E17 227 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 ABHD14BQ96IU4 210 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 RITA1Q96K30 269 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 TSNAXQ99598 290 aaKnown RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 B9D2Q9BPU9 175 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 HDHD3Q9BSH5 251 aaPredicted RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 PARP12Q9H0J9 701 aaKnown RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 SLA2Q9H6Q3 261 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 OR1A1Q9P1Q5 309 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 RNF150Q9ULK6 438 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 FOXA2Q9Y261 457 aaPredicted RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 KCNK7Q9Y2U2 307 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 NUBP2Q9Y5Y2 271 aa4.75□□□□□ -1.65
PTPN20-208ENST00000395727 PRKDCP78527 4128 aaKnown RBP4.75□□□□□ -1.65
PTPN20-208ENST00000395727 WI2-2373I1.2A0A1W2PRP0 233 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 METTL21EPA6NDL7 271 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 FABP7O15540 132 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 SOX15O60248 233 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 APOA2P02652 100 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 CD3GP09693 182 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 HOXD3P31249 432 aaPredicted RBP4.74□□□□□ -1.65
PTPN20-208ENST00000395727 LGALS7P47929 136 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 RAB9AP51151 201 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 CLDN12P56749 244 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 MRPS15P82914 257 aaKnown RBP4.74□□□□□ -1.65
PTPN20-208ENST00000395727 ZNF616Q08AN1 781 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 TMEM267Q0VDI3 215 aaPredicted RBP4.74□□□□□ -1.65
PTPN20-208ENST00000395727 PSG5Q15238 335 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 RPL39P5Q59GN2 51 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 HES5Q5TA89 166 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 ASPHD1Q5U4P2 390 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 TMEM65Q6PI78 240 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 C5orf24Q7Z6I8 188 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 TPRA1Q86W33 373 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 ZNF383Q8NA42 475 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 OR11H1Q8NG94 326 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 SETD6Q8TBK2 473 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 CNBD2Q96M20 576 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 TMEM68Q96MH6 324 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 Q9H521 79 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 PARP11Q9NR21 331 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 RDH8Q9NYR8 311 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 ZNF221Q9UK13 617 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 FBXO7Q9Y3I1 522 aa4.74□□□□□ -1.65
PTPN20-208ENST00000395727 LSM4Q9Y4Z0 139 aaKnown RBP4.74□□□□□ -1.65
PTPN20-208ENST00000395727 CMYA5Q8N3K9 4069 aa4.73□□□□□ -1.65
PTPN20-208ENST00000395727 A0A0A6YYH2 397 aa4.73□□□□□ -1.65
PTPN20-208ENST00000395727 A6NJ64 397 aa4.73□□□□□ -1.65
PTPN20-208ENST00000395727 G3V318 75 aa4.73□□□□□ -1.65
PTPN20-208ENST00000395727 H7C2Y5 167 aa4.73□□□□□ -1.65
PTPN20-208ENST00000395727 SLC22A5O76082 557 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms