RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 GBGT1Q8N5D6 347 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 TIMM8BQ9Y5J9 83 aaPredicted RBP13.07□□□□□ -0.32
PTBP1-204ENST00000394601 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 SIRPB1O00241 398 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 WISP2O76076 250 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 CBLN1P23435 193 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 GNG3P63215 75 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 Q6ZRM9 215 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 OR10V1Q8NGI7 309 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
PTBP1-204ENST00000394601 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 USF3Q68DE3 2245 aa13.07□□□□□ -0.32
PTBP1-204ENST00000394601 PAGE4O60829 102 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 CTXN2P0C2S0 81 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 OR5G3P0C626 314 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 TAS2R30P59541 319 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 PLGLB1Q02325 96 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-204ENST00000394601 MAJINQ3KP22 176 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 RDH5Q92781 318 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 OR2W1Q9Y3N9 320 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 RP1L1Q8IWN7 2480 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-204ENST00000394601 B4DEV8 164 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 F2Z2F3 143 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 F2RP25116 425 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 ZNF726P1Q15940 193 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 DHRS13Q6UX07 377 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 TMEM9BQ9NQ34 198 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 ABI3Q9P2A4 366 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 NAT8Q9UHE5 227 aa13.06□□□□□ -0.32
PTBP1-204ENST00000394601 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-204ENST00000394601 PFN1P07737 140 aaKnown RBP13.06□□□□□ -0.32
PTBP1-204ENST00000394601 ICE1Q9Y2F5 2266 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 GYPAP02724 150 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 SERPINE2P07093 398 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 VAMP3Q15836 100 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 ALKBH6Q3KRA9 238 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 VASH2Q86V25 355 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 STPG4Q8N801 248 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 TNFSF15O95150 251 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 COL5A1-AS1Q5SY13 56 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 ZNF497Q6ZNH5 498 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 SGMS2Q8NHU3 365 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 LOXL4Q96JB6 756 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 DERL1Q9BUN8 251 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 ABCA1O95477 2261 aa13.05□□□□□ -0.32
PTBP1-204ENST00000394601 ANKRD30BLA7E2S9 258 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 KLRC4-KLRK1H3BQV0 150 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 M0R296 226 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 SMPD2O60906 423 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 TMEM164Q5U3C3 297 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 OR4C5Q8NGB2 326 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 RNASEH2CQ8TDP1 164 aaKnown RBP13.04□□□□□ -0.32
PTBP1-204ENST00000394601 GPR146Q96CH1 333 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 CCL25O15444 150 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 HRASP01112 189 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 IL3RAP26951 378 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 PLP2Q04941 152 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 ZNF766Q5HY98 468 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 HES3Q5TGS1 186 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 ZCCHC14Q8WYQ9 949 aaKnown RBP13.04□□□□□ -0.32
PTBP1-204ENST00000394601 SMDT1Q9H4I9 107 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 TPRP12270 2363 aaKnown RBP13.04□□□□□ -0.32
PTBP1-204ENST00000394601 PCNX2A6NKB5 2137 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 J3QT63 122 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 IFNA1P01562 189 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 PSG2P11465 335 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 PSMB3P49720 205 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 RND2P52198 227 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
PTBP1-204ENST00000394601 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 TMEM170AQ8WVE7 144 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 SPIN2AQ99865 258 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 SPIN2BQ9BPZ2 258 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
PTBP1-204ENST00000394601 TMEM210A6NLX4 147 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 CLDN1O95832 211 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
PTBP1-204ENST00000394601 ARL16Q0P5N6 197 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 TMEM183BQ1AE95 376 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 CACNG5Q9UF02 275 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 PPP1R3CQ9UQK1 317 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 SH2D1BO14796 132 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 SERF1AO75920 110 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 SLC25A6P12236 298 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 IGHV1-2P23083 117 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 COL8A2P25067 703 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 CCKARP32238 428 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
PTBP1-204ENST00000394601 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
PTBP1-204ENST00000394601 MBNL3Q9NUK0 354 aaKnown RBP13.03□□□□□ -0.32
PTBP1-204ENST00000394601 OR6C3Q9NZP0 311 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms