RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DYRK1AQ13627 763 aa13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 ADTRPQ96IZ2 230 aa13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 OR2D2Q9H210 308 aa13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 ACOT13Q9NPJ3 140 aa13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 V9GY05 133 aa13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 ANKRD34BA5PLL1 514 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 SRRM4A7MD48 611 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 SHOXO15266 292 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 AIREO43918 545 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 IFNA6P05013 189 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 CSN3P07498 182 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 FCGR3AP08637 254 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 CD3GP09693 182 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 UBE2KP61086 200 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 HAGHQ16775 308 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 MRGPRG-AS1Q2M3A8 158 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 Q6ZS49 121 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 ADAD2Q8NCV1 583 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 DDB2Q92466 427 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 SNAPC3Q92966 411 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 RAB3CQ96E17 227 aa13.31□□□□□ -0.28
SNRPA1-202ENST00000394082 FAM223BA6NKX1 122 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 BET1O15155 118 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 CALRP27797 417 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 HSPA13P48723 471 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 CLDN12P56749 244 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 RPS25P62851 125 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 VMA21Q3ZAQ7 101 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 IGSF11Q5DX21 431 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 FAM209BQ5JX69 171 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 FAM223AQ8IWN6 122 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 LAX1Q8IWV1 398 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 BVESQ8NE79 360 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 OSR1Q8TAX0 266 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 PEMTQ9UBM1 199 aa13.3□□□□□ -0.28
SNRPA1-202ENST00000394082 TMEM272A0A1B0GTI8 110 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 MSGN1A6NI15 193 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 CREBL2O60519 120 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 OR9G9P0C7N8 305 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 GSTT2P0CG29 244 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 GSTT2BP0CG30 244 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 HSMCR30P0CW71 290 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 GADD45AP24522 165 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 FABP5Q01469 135 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 PRSS8Q16651 343 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 IZUMO2Q6UXV1 221 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 COA4Q9NYJ1 87 aa13.29□□□□□ -0.28
SNRPA1-202ENST00000394082 TRBV9A0A0B4J1U6 114 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 A0A0B4J203 849 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 RAB27BO00194 218 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 MFNGO00587 321 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 RGS10O43665 173 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 ATP6V1G2O95670 118 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 TRBV12-3P01733 135 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 RAB6AP20340 208 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 DUTP33316 252 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 ZFAND6Q6FIF0 208 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 LINC00322Q6ZN03 302 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 PRSS48Q7RTY5 328 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 C5orf30Q96GV9 206 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 PHB2Q99623 299 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 MGLLQ99685 303 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 TUBA4BQ9H853 241 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 TNCP24821 2201 aa13.28□□□□□ -0.28
SNRPA1-202ENST00000394082 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 TRAV1-2A0A0B4J238 106 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 SHISA3A0PJX4 238 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 HIST1H1DP16402 221 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 ARL6IP1Q15041 203 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 SSX1Q16384 188 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 IL17DQ8TAD2 202 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 SRSF12Q8WXF0 261 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 SPIN2AQ99865 258 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 SPIN2BQ9BPZ2 258 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 GINS4Q9BRT9 223 aa13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF230Q9UIE0 474 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-202ENST00000394082 PDCD5O14737 125 aa13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 RBMXL2O75526 392 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 PLA2G7Q13093 441 aa13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 TNXAQ16473 311 aa13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 H1FOOQ8IZA3 346 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 AKIP1Q9NQ31 210 aa13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 RBM7Q9Y580 266 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-202ENST00000394082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 METTL21EPA6NDL7 271 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 IFITM5A6NNB3 132 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 LINC00473A8K010 186 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 BMPR1BO00238 502 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 CRYZL1O95825 349 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 GNB3P16520 340 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 DTYMKP23919 212 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 CRHBPP24387 322 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 RHOGP84095 191 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 CDK10Q15131 360 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 HES5Q5TA89 166 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 SLC25A42Q86VD7 318 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms