RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SGPP2Q8IWX5 399 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 BVESQ8NE79 360 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 OR10R2Q8NGX6 335 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 HARBI1Q96MB7 349 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 SDHAF2Q9NX18 166 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 COA4Q9NYJ1 87 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 BLOC1S6Q9UL45 172 aa8.2□□□□□ -1.1
CAPN3-202ENST00000337571 TRBV6-7A0A0A0MS04 114 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 TRAV1-2A0A0B4J238 106 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 TRIM64CA6NLI5 447 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 H0Y980 276 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 MPPED1O15442 326 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 DIRAS3O95661 229 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 FCGR3AP08637 254 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 GNB3P16520 340 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 MAP2K4P45985 399 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 ARL6IP1Q15041 203 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 VMA21Q3ZAQ7 101 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 MUC7Q8TAX7 377 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 USMG5Q96IX5 58 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 ADTRPQ96IZ2 230 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 DCUN1D5Q9BTE7 237 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 PALMDQ9NP74 551 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 PEF1Q9UBV8 284 aaKnown RBP8.19□□□□□ -1.1
CAPN3-202ENST00000337571 RAB26Q9ULW5 256 aa8.19□□□□□ -1.1
CAPN3-202ENST00000337571 ELOA3CA0A087WX78 387 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-202ENST00000337571 MSGN1A6NI15 193 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 IFITM5A6NNB3 132 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 ACTL6BO94805 426 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 IGLV1-51P01701 117 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 LYL1P12980 280 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 RAB3BP20337 219 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 RAB6AP20340 208 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 HSPA13P48723 471 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 PJVKQ0ZLH3 352 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 KLF5Q13887 457 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-202ENST00000337571 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 ZNF367Q7RTV3 350 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 TEX45Q8NA69 505 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 MAFIPQ8WZ33 124 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 CNBD2Q96M20 576 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 TINAGL1Q9GZM7 467 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-202ENST00000337571 ATG5Q9H1Y0 275 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 ZNF230Q9UIE0 474 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-202ENST00000337571 KCNK7Q9Y2U2 307 aa8.18□□□□□ -1.1
CAPN3-202ENST00000337571 A0A0B4J203 849 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 CREBL2O60519 120 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-202ENST00000337571 BRI3O95415 125 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 CRYZL1O95825 349 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 CRYGBP07316 175 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 APELAP0DMC3 54 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 HIST1H1DP16402 221 aaKnown RBP8.17□□□□□ -1.1
CAPN3-202ENST00000337571 OR10A3P58181 314 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 TNXAQ16473 311 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 RPEL1Q2QD12 228 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 GTSCR1Q86UQ5 136 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 OR9G4Q8NGQ1 327 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 OSR1Q8TAX0 266 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-202ENST00000337571 ACOT12Q8WYK0 555 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 CABLES2Q9BTV7 478 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 ST6GALNAC5Q9BVH7 336 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 TUBA4BQ9H853 241 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 RYR3Q15413 4870 aa8.17□□□□□ -1.1
CAPN3-202ENST00000337571 TRDV1A0A1B0GX56 115 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 J3QRK9 145 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 RAB27BO00194 218 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 MFNGO00587 321 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 OR9G9P0C7N8 305 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 GALP22466 123 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 SYNJ2BPP57105 145 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 UBE2KP61086 200 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 TBCEQ15813 527 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-202ENST00000337571 CDNFQ49AH0 187 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 CASC10Q5T4H9 136 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 HAPLN4Q86UW8 402 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 SPIN2AQ99865 258 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 SPIN2BQ9BPZ2 258 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 NDUFB11Q9NX14 153 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 PEMTQ9UBM1 199 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 PRELID3BQ9Y3B1 194 aa8.16□□□□□ -1.1
CAPN3-202ENST00000337571 SRRM4A7MD48 611 aaKnown RBP8.15□□□□□ -1.1
CAPN3-202ENST00000337571 TUSC2O75896 110 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 SLC22A5O76082 557 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 CD36P16671 472 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 DTYMKP23919 212 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 DUTP33316 252 aaKnown RBP8.15□□□□□ -1.1
CAPN3-202ENST00000337571 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-202ENST00000337571 ATP5G2Q06055 141 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 SSX1Q16384 188 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 PRSS8Q16651 343 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 C22orf42Q6IC83 251 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 LCN12Q6JVE5 192 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 Q6ZS49 121 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms