RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 RRASP10301 218 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 GNB3P16520 340 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 AADACP22760 399 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 MYL9P24844 172 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 PSMD7P51665 324 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 OR10A3P58181 314 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 TAGLNQ01995 201 aaKnown RBP9.76□□□□□ -0.85
CD44-203ENST00000278386 RPEL1Q2QD12 228 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 VMA21Q3ZAQ7 101 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 TMEM177Q53S58 311 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 PRSS48Q7RTY5 328 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 GTSCR1Q86UQ5 136 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 OR10R2Q8NGX6 335 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 ACOT12Q8WYK0 555 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 CITED4Q96RK1 184 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 DUSP21Q9H596 190 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 ACOT13Q9NPJ3 140 aa9.76□□□□□ -0.85
CD44-203ENST00000278386 PEF1Q9UBV8 284 aaKnown RBP9.76□□□□□ -0.85
CD44-203ENST00000278386 ZNF230Q9UIE0 474 aaPredicted RBP9.76□□□□□ -0.85
CD44-203ENST00000278386 A0A0B4J203 849 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 H0Y980 276 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 MFNGO00587 321 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 CRYZL1O95825 349 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 CRYGBP07316 175 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 HIST1H1DP16402 221 aaKnown RBP9.75□□□□□ -0.85
CD44-203ENST00000278386 TALDO1P37837 337 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 DYRK1AQ13627 763 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 ARFRP1Q13795 201 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 TATDN3Q17R31 274 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 IDO2Q6ZQW0 420 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 Q8N1Y9 231 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 ADAM30Q9UKF2 790 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 KCNK7Q9Y2U2 307 aa9.75□□□□□ -0.85
CD44-203ENST00000278386 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 DIRAS3O95661 229 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 CRHBPP24387 322 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 EXOSC2Q13868 293 aaKnown RBP9.74□□□□□ -0.85
CD44-203ENST00000278386 KLF5Q13887 457 aaPredicted RBP9.74□□□□□ -0.85
CD44-203ENST00000278386 TBCEQ15813 527 aaPredicted RBP9.74□□□□□ -0.85
CD44-203ENST00000278386 LCN12Q6JVE5 192 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 ZNF343Q6P1L6 599 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 ZNF367Q7RTV3 350 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
CD44-203ENST00000278386 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 TUBA4BQ9H853 241 aa9.74□□□□□ -0.85
CD44-203ENST00000278386 GAR1Q9NY12 217 aaKnown RBP9.74□□□□□ -0.85
CD44-203ENST00000278386 METTL21EPA6NDL7 271 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 MSGN1A6NI15 193 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 SRRM4A7MD48 611 aaKnown RBP9.73□□□□□ -0.85
CD44-203ENST00000278386 J3QRK9 145 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 CREBL2O60519 120 aaPredicted RBP9.73□□□□□ -0.85
CD44-203ENST00000278386 ACTL6BO94805 426 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 OR9G9P0C7N8 305 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 RAB3BP20337 219 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 RAB6AP20340 208 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 DUTP33316 252 aaKnown RBP9.73□□□□□ -0.85
CD44-203ENST00000278386 UBE2KP61086 200 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 KCTD9Q7L273 389 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 Q8N402 240 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 C19orf73Q9NVV2 129 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 PEMTQ9UBM1 199 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 BLOC1S6Q9UL45 172 aa9.73□□□□□ -0.85
CD44-203ENST00000278386 SHISA3A0PJX4 238 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 SMIM30A4D0T7 59 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 FAM223BA6NKX1 122 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 IFITM5A6NNB3 132 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 LINC00473A8K010 186 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 A8MZ25 164 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 RAB27BO00194 218 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 TUSC2O75896 110 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 OR2A4O95047 310 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 BRI3O95415 125 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 PRH1P02810 166 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 SAA1P0DJI8 122 aaPredicted RBP9.72□□□□□ -0.85
CD44-203ENST00000278386 RHOGP84095 191 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 SSX1Q16384 188 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 PRSS8Q16651 343 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 OR2B11Q5JQS5 317 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 IL34Q6ZMJ4 242 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 FAM223AQ8IWN6 122 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 H1FOOQ8IZA3 346 aaPredicted RBP9.72□□□□□ -0.85
CD44-203ENST00000278386 TEX45Q8NA69 505 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 ADAD2Q8NCV1 583 aaKnown RBP9.72□□□□□ -0.85
CD44-203ENST00000278386 OSR1Q8TAX0 266 aaPredicted RBP9.72□□□□□ -0.85
CD44-203ENST00000278386 DYNLRB2Q8TF09 96 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 DDB2Q92466 427 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 SNAPC3Q92966 411 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 CNBD2Q96M20 576 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 CENPOQ9BU64 300 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 ATG5Q9H1Y0 275 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 VCX3BQ9H321 246 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 NDUFB11Q9NX14 153 aa9.72□□□□□ -0.85
CD44-203ENST00000278386 TRAV1-2A0A0B4J238 106 aa9.71□□□□□ -0.86
CD44-203ENST00000278386 RBMXL2O75526 392 aaKnown RBP9.71□□□□□ -0.86
CD44-203ENST00000278386 IFNA6P05013 189 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms