RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 BAK1Q16611 211 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 MFSD4AQ8N468 514 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 OR5AN1Q8NGI8 311 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 OR4C16Q8NGL9 310 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 RAB18Q9NP72 206 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 AKIP1Q9NQ31 210 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 TAS2R8Q9NYW2 309 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 H7C2Y5 167 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 PEX14O75381 377 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 SLC22A5O76082 557 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 IGKV1-16P04430 117 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 AKAIN1P0CW23 69 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 GNRHRP30968 328 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 THBS3P49746 956 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 F2RL1P55085 397 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 BLCAPP62952 87 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
GTF3A-209ENST00000640289 Q6ZS46 218 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 BVESQ8NE79 360 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 DDB2Q92466 427 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 PLSCR3Q9NRY6 295 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 SLC35D1Q9NTN3 355 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 MOB4Q9Y3A3 225 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 WASHC3Q9Y3C0 194 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 C2CD3Q4AC94 2353 aa10.52□□□□□ -0.73
GTF3A-209ENST00000640289 TMEM89A2RUT3 159 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 NCBP2LA6PVI3 153 aaKnown RBP10.51□□□□□ -0.73
GTF3A-209ENST00000640289 APOA2P02652 100 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 AMY1AP04745 511 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 MDKP21741 143 aaPredicted RBP10.51□□□□□ -0.73
GTF3A-209ENST00000640289 MC5RP33032 325 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 PPP5CP53041 499 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 RAG2P55895 527 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 ZNF45Q02386 682 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
GTF3A-209ENST00000640289 MEF2DQ14814 521 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 MMDQ15546 238 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 KRTAP21-3Q3LHN1 58 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 SCGB2B2Q4G0G5 96 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 OR2B11Q5JQS5 317 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 C16orf82Q7Z2V1 217 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 LHFPL1Q86WI0 220 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 TOMM5Q8N4H5 51 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 ARRDC1Q8N5I2 433 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 GDPD1Q8N9F7 314 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 TCTEX1D2Q8WW35 142 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 NPFFR1Q9GZQ6 430 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 SIGLEC9Q9Y336 463 aa10.51□□□□□ -0.73
GTF3A-209ENST00000640289 DISC1C4P0D8 188 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 TSPAN9O75954 239 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 NDUFA7O95182 113 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 MSMO1Q15800 293 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 ABCA11PQ4W5N1 156 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 ZNF66Q6ZN08 573 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 LINC00299Q6ZSB3 139 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 KCTD9Q7L273 389 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 PDPNQ86YL7 162 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 Q8N9W7 124 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 ZBTB34Q8NCN2 500 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 OR51S1Q8NGJ8 323 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 OR4C13Q8NGP0 309 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 ADTRPQ96IZ2 230 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 AKR1E2Q96JD6 320 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 HRASLSQ9HDD0 168 aa10.5□□□□□ -0.73
GTF3A-209ENST00000640289 GPR31O00270 319 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 NBR2O15453 112 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 FGF16O43320 207 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 FCGR3BO75015 233 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 PGAM2P15259 253 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 UCP3P55916 312 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 BRWD1-AS2P59051 145 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 RPS16P62249 146 aaKnown RBP10.49□□□□□ -0.73
GTF3A-209ENST00000640289 TMEM95Q3KNT9 176 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 PHLDA2Q53GA4 152 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 C9orf152Q5JTZ5 239 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 TRIQKQ629K1 86 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
GTF3A-209ENST00000640289 FAM71E2Q8N5Q1 922 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 TERB2Q8NHR7 220 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 LINC01006Q8NI28 216 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 FLYWCH2Q96CP2 140 aaKnown RBP10.49□□□□□ -0.73
GTF3A-209ENST00000640289 HSD17B10Q99714 261 aaKnown RBP10.49□□□□□ -0.73
GTF3A-209ENST00000640289 RSRP1Q9BUV0 290 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 PRSS22Q9GZN4 317 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 C16orf95Q9H693 158 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 RANBP3Q9H6Z4 567 aaPredicted RBP10.49□□□□□ -0.73
GTF3A-209ENST00000640289 MCUBQ9NWR8 336 aa10.49□□□□□ -0.73
GTF3A-209ENST00000640289 M0QZK8 103 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 PGLYRP1O75594 196 aaPredicted RBP10.48□□□□□ -0.73
GTF3A-209ENST00000640289 CRYZL1O95825 349 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 RLN1P04808 185 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 IL7P13232 177 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 PI3P19957 117 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 AP3S2P59780 193 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 TAGLNQ01995 201 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms