RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RDH8Q9NYR8 311 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
CUX1-219ENST00000606749 NBEAL2Q6ZNJ1 2754 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SORL1Q92673 2214 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 M0R1X1 148 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 ARPC1BO15143 372 aaKnown RBP5.86□□□□□ -1.47
CUX1-219ENST00000606749 SLC25A17O43808 307 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SPDEFO95238 335 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 IGLV2-23P01705 113 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 TRGV3P03979 118 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 CRYGBP07316 175 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 CD3GP09693 182 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 OR8U9P0C7N5 309 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 GSTT2P0CG29 244 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 GSTT2BP0CG30 244 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 GP9P14770 177 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 MAP2K4P45985 399 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SERPINB10P48595 397 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 TPPP2P59282 170 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SSBP2P81877 361 aaPredicted RBP5.86□□□□□ -1.47
CUX1-219ENST00000606749 PJVKQ0ZLH3 352 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 MOGAT2Q3SYC2 334 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 IGSF11Q5DX21 431 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 HES5Q5TA89 166 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 OVCH2Q7RTZ1 564 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 OR5T1Q8NG75 326 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 OR4A4PQ8NGN8 299 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 OR6Q1Q8NGQ2 317 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 ARPC1AQ92747 370 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 RAB3CQ96E17 227 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SLA2Q9H6Q3 261 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SLC35D1Q9NTN3 355 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 SDHAF2Q9NX18 166 aa5.86□□□□□ -1.47
CUX1-219ENST00000606749 TRBV6-7A0A0A0MS04 114 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 TRAV1-2A0A0B4J238 106 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 SRRM4A7MD48 611 aaKnown RBP5.85□□□□□ -1.47
CUX1-219ENST00000606749 C3orf84H3BNL1 204 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 RAB27BO00194 218 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 BET1O15155 118 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 FABP7O15540 132 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 CNIH1O95406 144 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 APOA2P02652 100 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 FCGR3AP08637 254 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 FRMD6-AS1P0C7T7 363 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 GNB3P16520 340 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 LGALS7P47929 136 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 OR10A3P58181 314 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 MRPS15P82914 257 aaKnown RBP5.85□□□□□ -1.47
CUX1-219ENST00000606749 PITPNAQ00169 270 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 SSX1Q16384 188 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 OR10R2Q8NGX6 335 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 OR10J5Q8NHC4 309 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 GRPEL2Q8TAA5 225 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 TMEM68Q96MH6 324 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 OR4C12Q96R67 309 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 OR2D2Q9H210 308 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 ZNF355PQ9NSJ1 428 aa5.85□□□□□ -1.47
CUX1-219ENST00000606749 ZNF230Q9UIE0 474 aaPredicted RBP5.85□□□□□ -1.47
CUX1-219ENST00000606749 TENM3Q9P273 2699 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
CUX1-219ENST00000606749 A0A0G2JLM5 398 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 C13orf42A0A1B0GVH6 325 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 ANKRD34BA5PLL1 514 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 TRIM64CA6NLI5 447 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 IFITM5A6NNB3 132 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 H3BUA1 57 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 PDCD5O14737 125 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 BRI3O95415 125 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 DIRAS3O95661 229 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 RAB6AP20340 208 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 ZP3P21754 424 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 TAGLNQ01995 201 aaKnown RBP5.84□□□□□ -1.47
CUX1-219ENST00000606749 KLF5Q13887 457 aaPredicted RBP5.84□□□□□ -1.47
CUX1-219ENST00000606749 SRSF7Q16629 238 aaKnown RBP eCLIP5.84□□□□□ -1.47
CUX1-219ENST00000606749 MRGPRG-AS1Q2M3A8 158 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 TMEM177Q53S58 311 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 Q8N1Y9 231 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 POC5Q8NA72 575 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 BVESQ8NE79 360 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 MAFIPQ8WZ33 124 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 C5orf30Q96GV9 206 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 HARBI1Q96MB7 349 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 RCHY1Q96PM5 261 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 CABLES2Q9BTV7 478 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 ELOVL1Q9BW60 279 aa5.84□□□□□ -1.47
CUX1-219ENST00000606749 RANGRFQ9HD47 186 aaPredicted RBP5.84□□□□□ -1.47
CUX1-219ENST00000606749 A0A075B6Q4 140 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 IGKV1D-8A0A087WSZ0 117 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 A0A0B4J203 849 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 TRDV1A0A1B0GX56 115 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 METTL21EPA6NDL7 271 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 MSGN1A6NI15 193 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 MFNGO00587 321 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 SHOXO15266 292 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 IGLV1-51P01701 117 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 RRASP10301 218 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 HIST1H1DP16402 221 aaKnown RBP5.83□□□□□ -1.48
CUX1-219ENST00000606749 RAB3BP20337 219 aa5.83□□□□□ -1.48
CUX1-219ENST00000606749 GADD45AP24522 165 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms