RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RDH8Q9NYR8 311 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 TRAV18A0A075B6X5 111 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SAA2-SAA4A0A096LPE2 208 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SMIM31A0A1B0GVY4 71 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF736B4DX44 427 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-219ENST00000569136 AP4M1O00189 453 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 XRCC3O43542 346 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SLC22A5O76082 557 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SAA2P0DJI9 122 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-219ENST00000569136 CT45A6P0DMU7 189 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 CT45A5P0DMU8 189 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 CT45A7P0DMV0 189 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 CBX5P45973 191 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 GPR12P47775 334 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 OR3A3P47888 321 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 GNG2P59768 71 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SLC35B1P78383 322 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF260Q3ZCT1 412 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 CNIH2Q6PI25 160 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 C5orf24Q7Z6I8 188 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SLC35E3Q7Z769 313 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 ANKRD13BQ86YJ7 626 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 Q8N9W7 124 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 NPBQ8NG41 125 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 OR4F17Q8NGA8 305 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 OR4X2Q8NGF9 303 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 OR13F1Q8NGS4 319 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 LGALS14Q8TCE9 139 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 ACOT12Q8WYK0 555 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 SLC25A46Q96AG3 418 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 OR4F4Q96R69 305 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 NABP2Q9BQ15 211 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 CABLES2Q9BTV7 478 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 FUNDC2Q9BWH2 189 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 OR1A1Q9P1Q5 309 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 RNF150Q9ULK6 438 aa7.27□□□□□ -1.25
CAPN3-219ENST00000569136 RBM7Q9Y580 266 aaKnown RBP7.27□□□□□ -1.25
CAPN3-219ENST00000569136 PKD1L1Q8TDX9 2849 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 IGKV1-6A0A0C4DH72 117 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 BET1O15155 118 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 TFAP2AP05549 437 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 OR8U9P0C7N5 309 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 CD28P10747 220 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 SOX6P35712 828 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 LGALS7P47929 136 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 RORCP51449 518 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 F2RL1P55085 397 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 ACTBP60709 375 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 LSM3P62310 102 aaKnown RBP7.26□□□□□ -1.25
CAPN3-219ENST00000569136 IGSF11Q5DX21 431 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 LIN54Q6MZP7 749 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 OR5H6Q8NGV6 325 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 OR8U1Q8NH10 309 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 ADTRPQ96IZ2 230 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 CYYR1Q96J86 154 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 MRPL20Q9BYC9 149 aaKnown RBP7.26□□□□□ -1.25
CAPN3-219ENST00000569136 MRPS26Q9BYN8 205 aaKnown RBP7.26□□□□□ -1.25
CAPN3-219ENST00000569136 AUNIPQ9H7T9 357 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 ZFP57Q9NU63 452 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 KIAA1456Q9P272 454 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF230Q9UIE0 474 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF580Q9UK33 172 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 WASHC3Q9Y3C0 194 aa7.26□□□□□ -1.25
CAPN3-219ENST00000569136 TSSC4Q9Y5U2 329 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-219ENST00000569136 PSMB11A5LHX3 300 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 TMEM235A6NFC5 223 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 H0YJW9 148 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 NBR2O15453 112 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 APOA2P02652 100 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 OR5H8P0DN80 308 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 RRASP10301 218 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 GYPEP15421 78 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 SLC6A1P30531 599 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 MMDQ15546 238 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 RPL39P5Q59GN2 51 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 UBE2NLQ5JXB2 153 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 MZT2AQ6P582 158 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 GPR141Q7Z602 305 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 H1FOOQ8IZA3 346 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-219ENST00000569136 FAM71E2Q8N5Q1 922 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 C11orf44Q8N8P7 122 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 FLYWCH2Q96CP2 140 aaKnown RBP7.25□□□□□ -1.25
CAPN3-219ENST00000569136 ABHD14BQ96IU4 210 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 TSNAXQ99598 290 aaKnown RBP7.25□□□□□ -1.25
CAPN3-219ENST00000569136 CITED2Q99967 270 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-219ENST00000569136 ANXA10Q9UJ72 324 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 OR2W1Q9Y3N9 320 aa7.25□□□□□ -1.25
CAPN3-219ENST00000569136 SH2D7A6NKC9 451 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 H7C2Y5 167 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 TPPPO94811 219 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 HLA-DRB1P01911 266 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 HLA-DQB1P01920 261 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 APOA1P02647 267 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 IGF1P05019 195 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 LUMP51884 338 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 VBP1P61758 197 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 RPS16P62249 146 aaKnown RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 TMEM267Q0VDI3 215 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms