RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MLNP12872 115 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 GABRA1P14867 456 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 DYNLL1P63167 89 aaKnown RBP3.09□□□□□ -1.91
SMG1-204ENST00000561940 MGAT3Q09327 533 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 BIKQ13323 160 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 GOLGA7BQ2TAP0 167 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 PDPK2PQ6A1A2 396 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 ZFAND6Q6FIF0 208 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 PAGE2Q7Z2X7 111 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 CRLF3Q8IUI8 442 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 RNASEH2CQ8TDP1 164 aaKnown RBP3.09□□□□□ -1.91
SMG1-204ENST00000561940 RHOFQ9HBH0 211 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 ASF1BQ9NVP2 202 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 ZNF230Q9UIE0 474 aaPredicted RBP3.09□□□□□ -1.91
SMG1-204ENST00000561940 POMPQ9Y244 141 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 SETD2Q9BYW2 2564 aaPredicted RBP3.09□□□□□ -1.91
SMG1-204ENST00000561940 F5P12259 2224 aa3.09□□□□□ -1.91
SMG1-204ENST00000561940 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.92
SMG1-204ENST00000561940 AKAP13Q12802 2813 aa3.09□□□□□ -1.92
SMG1-204ENST00000561940 SPEF2Q9C093 1822 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 TANC1Q9C0D5 1861 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 IGHV1-45A0A0A0MS14 117 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 LEUTXA8MZ59 168 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 F8VZ95 297 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 SMLR1H3BR10 107 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 C15orf65H3BRN8 121 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 CETN3O15182 167 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 HLA-EP13747 358 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 ZNF3P17036 446 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 CD52P31358 61 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 KDELR2P33947 212 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 CBX5P45973 191 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 RBM48Q5RL73 367 aaKnown RBP3.08□□□□□ -1.92
SMG1-204ENST00000561940 SLC25A45Q8N413 288 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 ATP6V1C2Q8NEY4 427 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 CCDC12Q8WUD4 166 aaPredicted RBP3.08□□□□□ -1.92
SMG1-204ENST00000561940 FGF13Q92913 245 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 FAM210AQ96ND0 272 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 DUSP21Q9H596 190 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 TRAPPC1Q9Y5R8 145 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 URGCP-MRPS24S4R325 110 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 ZNF407Q9C0G0 2248 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 SPG11Q96JI7 2443 aa3.08□□□□□ -1.92
SMG1-204ENST00000561940 USP9YO00507 2555 aaPredicted RBP3.07□□□□□ -1.92
SMG1-204ENST00000561940 MYH2Q9UKX2 1941 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 KNTC1P50748 2209 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 A6NED7 52 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 M0QZ92 97 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 EPPINO95925 133 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 P0C880 135 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 PYCR1P32322 319 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 FOXA1P55317 472 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 MAP3K7CLP57077 242 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 RHOAP61586 193 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 PMS2P3Q13401 168 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 SPIN3Q5JUX0 258 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 AMMECR1LQ6DCA0 310 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 ZNF664Q8N3J9 261 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 DDIT4LQ96D03 193 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 REEP6Q96HR9 211 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 HBEGFQ99075 208 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 PRSS27Q9BQR3 290 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 OR51E2Q9H255 320 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 COMMD9Q9P000 198 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 ATAD5Q96QE3 1844 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 PLXNB1O43157 2135 aa3.07□□□□□ -1.92
SMG1-204ENST00000561940 H3BMM0 161 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 SCN2BO60939 215 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 HLA-AP01891 365 aaKnown RBP3.06□□□□□ -1.92
SMG1-204ENST00000561940 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 AKR1C4P17516 323 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 ATF1P18846 271 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 EVI2BP34910 448 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 IHHQ14623 411 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 ZNF141Q15928 474 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 BRD3OSQ6XYD6 125 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 CYHR1Q6ZMK1 362 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 OLIG3Q7RTU3 272 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 BOD1L2Q8IYS8 172 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 OR5AK3PQ8NH89 298 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 DTD1Q8TEA8 209 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 UBE2WQ96B02 151 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 TVP23CQ96ET8 276 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 ZNF251Q9BRH9 671 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 ZNHIT6Q9NWK9 470 aaKnown RBP3.06□□□□□ -1.92
SMG1-204ENST00000561940 ZNF443Q9Y2A4 671 aaPredicted RBP3.06□□□□□ -1.92
SMG1-204ENST00000561940 U3KQK5 164 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 COL12A1Q99715 3063 aa3.06□□□□□ -1.92
SMG1-204ENST00000561940 MKRN2OSH3BPM6 223 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 MPZL2O60487 215 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 PSIP1O75475 530 aaKnown RBP3.05□□□□□ -1.92
SMG1-204ENST00000561940 IGLV6-57P01721 117 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 IGHV3-53P01767 116 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 IGKV4-1P06312 121 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 PSMD7P51665 324 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 RAB2AP61019 212 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 SLAMF1Q13291 335 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 CASP8Q14790 479 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms