RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 DHRS7BQ6IAN0 325 aaPredicted RBP17.37■□□□□ 0.37
SNX1-210ENST00000560260 ARRDC1Q8N5I2 433 aa17.37■□□□□ 0.37
SNX1-210ENST00000560260 GDPD1Q8N9F7 314 aa17.37■□□□□ 0.37
SNX1-210ENST00000560260 OR2T10Q8NGZ9 312 aa17.37■□□□□ 0.37
SNX1-210ENST00000560260 MRGPRFQ96AM1 343 aa17.37■□□□□ 0.37
SNX1-210ENST00000560260 C19orf24Q9BVV8 132 aa17.37■□□□□ 0.37
SNX1-210ENST00000560260 TAS2R8Q9NYW2 309 aa17.37■□□□□ 0.37
SNX1-210ENST00000560260 MOSP00540 346 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 AMY1AP04745 511 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 AMY2AP04746 511 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 GNRHRP30968 328 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 THBS3P49746 956 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 RPL15P61313 204 aaKnown RBP17.36■□□□□ 0.37
SNX1-210ENST00000560260 ZNF45Q02386 682 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 MSMO1Q15800 293 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 Q6ZSV7 163 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 PLSCR3Q9NRY6 295 aa17.36■□□□□ 0.37
SNX1-210ENST00000560260 SH2D7A6NKC9 451 aaPredicted RBP17.35■□□□□ 0.37
SNX1-210ENST00000560260 TNFSF12O43508 249 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 SLC22A5O76082 557 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 IFNA6P05013 189 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 HKR1P10072 659 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 CNTFRP26992 372 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 MEF2DQ14814 521 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 Q6ZS46 218 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 C16orf82Q7Z2V1 217 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 SLC35D1Q9NTN3 355 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 MOB4Q9Y3A3 225 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 WASHC3Q9Y3C0 194 aa17.35■□□□□ 0.37
SNX1-210ENST00000560260 IGKV1-16P04430 117 aa17.34■□□□□ 0.37
SNX1-210ENST00000560260 PPP5CP53041 499 aa17.34■□□□□ 0.37
SNX1-210ENST00000560260 F2RL1P55085 397 aa17.34■□□□□ 0.37
SNX1-210ENST00000560260 MDFIQ99750 246 aa17.34■□□□□ 0.37
SNX1-210ENST00000560260 RAB18Q9NP72 206 aa17.34■□□□□ 0.37
SNX1-210ENST00000560260 RNF212BA8MTL3 300 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 H7C2Y5 167 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 APOA2P02652 100 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 BRWD1-AS2P59051 145 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 BLCAPP62952 87 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 SCGB2B2Q4G0G5 96 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 OR2B11Q5JQS5 317 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 KCTD9Q7L273 389 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 PDPNQ86YL7 162 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 TOMM5Q8N4H5 51 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 C5orf56Q8N8D9 126 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 Q8N9W7 124 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 BVESQ8NE79 360 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 ZNF702PQ9H963 129 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 HRASLSQ9HDD0 168 aa17.33■□□□□ 0.36
SNX1-210ENST00000560260 DNHD1Q96M86 4753 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 NDUFA7O95182 113 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 CRYBA1P05813 215 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 IL7P13232 177 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 MC5RP33032 325 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 RAG2P55895 527 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 UCP3P55916 312 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 KRTAP21-3Q3LHN1 58 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 ZBTB34Q8NCN2 500 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 OR51S1Q8NGJ8 323 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 OR13C8Q8NGS7 320 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 TMEM158Q8WZ71 300 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 ADTRPQ96IZ2 230 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 AKR1E2Q96JD6 320 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 HSD17B10Q99714 261 aaKnown RBP17.32■□□□□ 0.36
SNX1-210ENST00000560260 RSRP1Q9BUV0 290 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 NPFFR1Q9GZQ6 430 aa17.32■□□□□ 0.36
SNX1-210ENST00000560260 TMEM89A2RUT3 159 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 DISC1C4P0D8 188 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 TSPAN9O75954 239 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 PHLDA2Q53GA4 152 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 C11orf88Q6PI97 169 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 ZNF66Q6ZN08 573 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 TERB2Q8NHR7 220 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 TCTEX1D2Q8WW35 142 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 SLC2A8Q9NY64 477 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 SIGLEC9Q9Y336 463 aa17.31■□□□□ 0.36
SNX1-210ENST00000560260 GPR31O00270 319 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 FGF16O43320 207 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 PEX14O75381 377 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 PI3P19957 117 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 MDKP21741 143 aaPredicted RBP17.3■□□□□ 0.36
SNX1-210ENST00000560260 MMDQ15546 238 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 ABCA11PQ4W5N1 156 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 TRIQKQ629K1 86 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 ZNF57Q68EA5 555 aaPredicted RBP17.3■□□□□ 0.36
SNX1-210ENST00000560260 FAM71E2Q8N5Q1 922 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 MARCH1Q8TCQ1 289 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 S100ZQ8WXG8 99 aa17.3■□□□□ 0.36
SNX1-210ENST00000560260 RANBP3Q9H6Z4 567 aaPredicted RBP17.3■□□□□ 0.36
SNX1-210ENST00000560260 NCBP2LA6PVI3 153 aaKnown RBP17.29■□□□□ 0.36
SNX1-210ENST00000560260 FCGR3BO75015 233 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 PGLYRP1O75594 196 aaPredicted RBP17.29■□□□□ 0.36
SNX1-210ENST00000560260 NDUFA3O95167 84 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 RLN1P04808 185 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 PGAM2P15259 253 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 AP3S2P59780 193 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 TMEM177Q53S58 311 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 SLC38A6Q8IZM9 456 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 Q8N2B8 174 aa17.29■□□□□ 0.36
SNX1-210ENST00000560260 OR4C13Q8NGP0 309 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms