RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SOX15O60248 233 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 TRGV3P03979 118 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 IGKV1-16P04430 117 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 OR8U9P0C7N5 309 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 GSTT2P0CG29 244 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 GSTT2BP0CG30 244 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 GNB3P16520 340 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 RAB3BP20337 219 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 SERPINB10P48595 397 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 OR10A3P58181 314 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 RUNX1Q01196 453 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 FXYD3Q14802 87 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 TBCEQ15813 527 aaPredicted RBP8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 MOGAT2Q3SYC2 334 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 IGSF11Q5DX21 431 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 ZNF562Q6V9R5 426 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 ZNF429Q86V71 674 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 ZNF383Q8NA42 475 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 OR10R2Q8NGX6 335 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 ARPC1AQ92747 370 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 PTX4Q96A99 478 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 ATG5Q9H1Y0 275 aa8.2□□□□□ -1.1
SPTLC2-205ENST00000556607 IGKV1-6A0A0C4DH72 117 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 SMIM30A4D0T7 59 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 METTL21EPA6NDL7 271 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 J3QRK9 145 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 SHOXO15266 292 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 PROP1O75360 226 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 FCGR3AP08637 254 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 NHLRC4P0CG21 123 aaPredicted RBP8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 EGR2P11161 476 aaPredicted RBP8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 PITPNAQ00169 270 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 SSX1Q16384 188 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 AKIRIN2Q53H80 203 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 ASPHD1Q5U4P2 390 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 C22orf42Q6IC83 251 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 CD200R1LQ6Q8B3 271 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 OR5T1Q8NG75 326 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 HARBI1Q96MB7 349 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 PHB2Q99623 299 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 RSRP1Q9BUV0 290 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 TOLLIPQ9H0E2 274 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 SLA2Q9H6Q3 261 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 TPSG1Q9NRR2 321 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 ZNF230Q9UIE0 474 aaPredicted RBP8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 LSM4Q9Y4Z0 139 aaKnown RBP8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 SMAD5-AS1Q9Y6J3 95 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 U3KQK5 164 aa8.19□□□□□ -1.1
SPTLC2-205ENST00000556607 A0A0B4J203 849 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 TRAV1-2A0A0B4J238 106 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 C13orf42A0A1B0GVH6 325 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 IFITM5A6NNB3 132 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 LDLRAD4O15165 306 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 SPDEFO95238 335 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 HSPB1P04792 205 aaKnown RBP8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 SNRPBP14678 240 aaKnown RBP8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 BVESQ8NE79 360 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 OR6Q1Q8NGQ2 317 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 OR4C12Q96R67 309 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 SDHAF2Q9NX18 166 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 KCNK7Q9Y2U2 307 aa8.18□□□□□ -1.1
SPTLC2-205ENST00000556607 DNAH3Q8TD57 4116 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 TRBV6-7A0A0A0MS04 114 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 TRDV1A0A1B0GX56 115 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 ANKRD34BA5PLL1 514 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 SPNP16150 400 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 HIST1H1DP16402 221 aaKnown RBP8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 RAB6AP20340 208 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 PSMB9P28065 219 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 LGALS7P47929 136 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 SRSF7Q16629 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 C19orf54Q5BKX5 351 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 ACSM6Q6P461 480 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 DCUN1D5Q9BTE7 237 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 CABLES2Q9BTV7 478 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 ST6GALNAC5Q9BVH7 336 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 NDUFB11Q9NX14 153 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 COA4Q9NYJ1 87 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 RAB26Q9ULW5 256 aa8.17□□□□□ -1.1
SPTLC2-205ENST00000556607 A0A0G2JLM5 398 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 RAB27BO00194 218 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 MFNGO00587 321 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 ARPC1BO15143 372 aaKnown RBP8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 MPPED1O15442 326 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 APELAP0DMC3 54 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 RRASP10301 218 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 GP9P14770 177 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 TAGLNQ01995 201 aaKnown RBP8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 PJVKQ0ZLH3 352 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 ARL6IP1Q15041 203 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 TNXAQ16473 311 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 CDNFQ49AH0 187 aa8.16□□□□□ -1.1
SPTLC2-205ENST00000556607 OVCH2Q7RTZ1 564 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms