RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 RAB9BQ9NP90 201 aa9.77□□□□□ -0.85
USP28-212ENST00000544750 PDCD5O14737 125 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 RGS11O94810 467 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 GADD45AP24522 165 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 PSMD7P51665 324 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 KLF5Q13887 457 aaPredicted RBP9.76□□□□□ -0.85
USP28-212ENST00000544750 GNMTQ14749 295 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 PLAC9Q5JTB6 97 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 LY6G6FQ5SQ64 297 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 C6orf183Q5T699 404 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 TRAT1Q6PIZ9 186 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 HDHD3Q9BSH5 251 aaPredicted RBP9.76□□□□□ -0.85
USP28-212ENST00000544750 URM1Q9BTM9 101 aaKnown RBP9.76□□□□□ -0.85
USP28-212ENST00000544750 ABHD14AQ9BUJ0 271 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 RSRP1Q9BUV0 290 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 FBXL15Q9H469 300 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 TAF9BQ9HBM6 251 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 HSF4Q9ULV5 492 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 GAB2Q9UQC2 676 aa9.76□□□□□ -0.85
USP28-212ENST00000544750 TRBV6-6A0A0A6YYG2 114 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 RRHO14718 337 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 TNFAIP8O95379 198 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 OR3A3P47888 321 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 TMEM267Q0VDI3 215 aaPredicted RBP9.75□□□□□ -0.85
USP28-212ENST00000544750 HMGN3Q15651 99 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 MOGAT2Q3SYC2 334 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 ACTBL2Q562R1 376 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 ZNF554Q86TJ5 538 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 PRR18Q8N4B5 295 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 OR52L2PQ8NGH6 319 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 ARHGAP5-AS1Q96IT6 56 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 MS4A10Q96PG2 267 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 FAM110AQ9BQ89 295 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
USP28-212ENST00000544750 PECRQ9BY49 303 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 SLA2Q9H6Q3 261 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 RANGRFQ9HD47 186 aaPredicted RBP9.75□□□□□ -0.85
USP28-212ENST00000544750 OR2S2Q9NQN1 319 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 PLEKHJ1Q9NW61 149 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 AK3Q9UIJ7 227 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 SSR3Q9UNL2 185 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 KCNK7Q9Y2U2 307 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 A3GALT2U3KPV4 340 aa9.75□□□□□ -0.85
USP28-212ENST00000544750 SAA2-SAA4A0A096LPE2 208 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 H0Y980 276 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 YPEL1O60688 119 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 CLEC2LP0C7M8 214 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 SAA2P0DJI9 122 aaPredicted RBP9.74□□□□□ -0.85
USP28-212ENST00000544750 SNRPBP14678 240 aaKnown RBP9.74□□□□□ -0.85
USP28-212ENST00000544750 CD36P16671 472 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 PPP1CCP36873 323 aaKnown RBP9.74□□□□□ -0.85
USP28-212ENST00000544750 MECP2P51608 486 aaKnown RBP9.74□□□□□ -0.85
USP28-212ENST00000544750 TPPP2P59282 170 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 HTD2P86397 168 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 UNQ5815/PRO19632Q6UWF5 114 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 PPP1R27Q86WC6 154 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 LFNGQ8NES3 379 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 TSPAN14Q8NG11 270 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 OR9G4Q8NGQ1 327 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 YPEL2Q96QA6 119 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 CENPOQ9BU64 300 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 TUBA4BQ9H853 241 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 SIGLEC8Q9NYZ4 499 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 JPT1Q9UK76 154 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 RAB22AQ9UL26 194 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 CEPT1Q9Y6K0 416 aa9.74□□□□□ -0.85
USP28-212ENST00000544750 A0A087WXM4 84 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 IZUMO1RA6ND01 250 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 NOTOA8MTQ0 251 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 RAB27BO00194 218 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 CSN3P07498 182 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 RAB6AP20340 208 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 ZP3P21754 424 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 SDC2P34741 201 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 TGFBR1P36897 503 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 FAM71F2Q6NXP2 309 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 FAM131AQ6UXB0 335 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 TPRA1Q86W33 373 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 OR56B1Q8NGI3 324 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 YIPF6Q96EC8 236 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 RNF150Q9ULK6 438 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 RYR1P21817 5038 aa9.73□□□□□ -0.85
USP28-212ENST00000544750 LOC100506127A0A0U1RQW1 187 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 RBMY1BA6NDE4 496 aaKnown RBP9.72□□□□□ -0.85
USP28-212ENST00000544750 RBMY1EA6NEQ0 496 aaKnown RBP9.72□□□□□ -0.85
USP28-212ENST00000544750 MFNGO00587 321 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 TRGV3P03979 118 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 TFAP2AP05549 437 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 RBMY1DP0C7P1 496 aaKnown RBP9.72□□□□□ -0.85
USP28-212ENST00000544750 SMIM18P0DKX4 95 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 CT45A6P0DMU7 189 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 CT45A5P0DMU8 189 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 CT45A7P0DMV0 189 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 SFXN4Q6P4A7 337 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 ZNF562Q6V9R5 426 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 MOB1BQ7L9L4 216 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 GTSCR1Q86UQ5 136 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 Q8N402 240 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms