RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 RAB27BO00194 218 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 CD3GP09693 182 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RBMY1DP0C7P1 496 aaKnown RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 GP9P14770 177 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RAB3BP20337 219 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 GADD45AP24522 165 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 FGF9P31371 208 aaPredicted RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RAB9AP51151 201 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 CX3CL1P78423 397 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 MRPS15P82914 257 aaKnown RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 TMEM267Q0VDI3 215 aaPredicted RBP8.14□□□□□ -1.11
CPSF1-203ENST00000527916 ARL6IP1Q15041 203 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 AKIRIN2Q53H80 203 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 HES5Q5TA89 166 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 UBE2UQ5VVX9 321 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 OR10R2Q8NGX6 335 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 KLK15Q9H2R5 256 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 FBXL15Q9H469 300 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RDH8Q9NYR8 311 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 VSIG4Q9Y279 399 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 WSB1Q9Y6I7 421 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 RYR1P21817 5038 aa8.14□□□□□ -1.11
CPSF1-203ENST00000527916 HERC2O95714 4834 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 METTL21EPA6NDL7 271 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 H7C2Y5 167 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 MFNGO00587 321 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 FABP7O15540 132 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 SPDEFO95238 335 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 ATP6V1G2O95670 118 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 IFNA6P05013 189 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 TFAP2AP05549 437 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 FCGR3AP08637 254 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 EGR2P11161 476 aaPredicted RBP8.13□□□□□ -1.11
CPSF1-203ENST00000527916 SPNP16150 400 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 OR10A3P58181 314 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 TAGLNQ01995 201 aaKnown RBP8.13□□□□□ -1.11
CPSF1-203ENST00000527916 ZNF616Q08AN1 781 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 PLA2G7Q13093 441 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 PYHIN1Q6K0P9 492 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 GLDNQ6ZMI3 551 aaPredicted RBP8.13□□□□□ -1.11
CPSF1-203ENST00000527916 Q6ZS49 121 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 TPRA1Q86W33 373 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 PDPNQ86YL7 162 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 SPARTQ8N0X7 666 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 OR6Q1Q8NGQ2 317 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 OR1N2Q8NGR9 330 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 FCGR1BQ92637 280 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
CPSF1-203ENST00000527916 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 CABLES2Q9BTV7 478 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 Q9H521 79 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 PARP11Q9NR21 331 aa8.13□□□□□ -1.11
CPSF1-203ENST00000527916 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 TRBV6-7A0A0A0MS04 114 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 TRIM64CA6NLI5 447 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 FCN1O00602 326 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 OVOL1O14753 267 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 SAP30O75446 220 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 GSTT2P0CG29 244 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 GSTT2BP0CG30 244 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 HIST1H1DP16402 221 aaKnown RBP8.12□□□□□ -1.11
CPSF1-203ENST00000527916 LGALS7P47929 136 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 NDPQ00604 133 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 PLGLAQ15195 96 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 PSG5Q15238 335 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 MOGAT2Q3SYC2 334 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 C22orf42Q6IC83 251 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 ZNF383Q8NA42 475 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 DRAXINQ8NBI3 349 aaPredicted RBP8.12□□□□□ -1.11
CPSF1-203ENST00000527916 OR10J5Q8NHC4 309 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 FLYWCH2Q96CP2 140 aaKnown RBP8.12□□□□□ -1.11
CPSF1-203ENST00000527916 FOXA2Q9Y261 457 aaPredicted RBP8.12□□□□□ -1.11
CPSF1-203ENST00000527916 FBXO7Q9Y3I1 522 aa8.12□□□□□ -1.11
CPSF1-203ENST00000527916 A0A1W2PN81 502 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 SLC25A17O43808 307 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 SOX15O60248 233 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 APOA2P02652 100 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 IGHV4-30-4P0DP06 118 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 GNB3P16520 340 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 CHRNA7P36544 502 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 RPS16P62249 146 aaKnown RBP8.11□□□□□ -1.11
CPSF1-203ENST00000527916 IGSF11Q5DX21 431 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 PPP1R27Q86WC6 154 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 NR2C2APQ86WQ0 139 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 SGPP2Q8IWX5 399 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 GNB4Q9HAV0 340 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 TPSG1Q9NRR2 321 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 TXNL4BQ9NX01 149 aaKnown RBP8.11□□□□□ -1.11
CPSF1-203ENST00000527916 METTL1Q9UBP6 276 aaKnown RBP8.11□□□□□ -1.11
CPSF1-203ENST00000527916 STUB1Q9UNE7 303 aa8.11□□□□□ -1.11
CPSF1-203ENST00000527916 M0R1X1 148 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 ARPC1BO15143 372 aaKnown RBP8.1□□□□□ -1.11
CPSF1-203ENST00000527916 BET1O15155 118 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 SCGNO76038 276 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 CRYGBP07316 175 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms