RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 DUXBA0A1W2PPF3 345 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 RBFOX2O43251 390 aaKnown RBP eCLIP8.43□□□□□ -1.06
RFC1-211ENST00000509084 ATG12O94817 140 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 IGHV1-69P01742 117 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 APOA2P02652 100 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 SERPINE2P07093 398 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 OR5AC1P0C628 307 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 UCP1P25874 307 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 RAB13P51153 203 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 SUPT4H1P63272 117 aaKnown RBP8.43□□□□□ -1.06
RFC1-211ENST00000509084 SLC9A3R2Q15599 337 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 RTL8BQ17RB0 113 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 RPL39P5Q59GN2 51 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 DHRS7BQ6IAN0 325 aaPredicted RBP8.43□□□□□ -1.06
RFC1-211ENST00000509084 LGI3Q8N145 548 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 C12orf45Q8N5I9 185 aaPredicted RBP8.43□□□□□ -1.06
RFC1-211ENST00000509084 OR4S2Q8NH73 311 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 CASTOR1Q8WTX7 329 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 TMEM222Q9H0R3 208 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 HECTD1Q9ULT8 2610 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 TACC2O95359 2948 aa8.43□□□□□ -1.06
RFC1-211ENST00000509084 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 CENPVL3A0A0U1RRI6 287 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 LY6LH3BQJ8 138 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 SMAD7O15105 426 aaKnown RBP8.42□□□□□ -1.06
RFC1-211ENST00000509084 NPFFO15130 113 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 WIPF1O43516 503 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 SSNA1O43805 119 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 PROP1O75360 226 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 TRAPPC2P0DI81 140 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 TRAPPC2BP0DI82 140 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 MC5RP33032 325 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 DLX1P56177 255 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
RFC1-211ENST00000509084 TMEM187Q14656 261 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 TPTE2P1Q5T6R2 138 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 PDPNQ86YL7 162 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 SPAG16Q8N0X2 631 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 LRTM2Q8N967 370 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 OR52B4Q8NGK2 314 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 DDB2Q92466 427 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 MALSU1Q96EH3 234 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 TP53RKQ96S44 253 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 NABP2Q9BQ15 211 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 MED28Q9H204 178 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 SLC35D1Q9NTN3 355 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 ZNRD1Q9P1U0 126 aa8.42□□□□□ -1.06
RFC1-211ENST00000509084 hCG_2014768A0A024R1R8 64 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 IGHV1-3A0A0C4DH29 117 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 LINC00473A8K010 186 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 CD5LO43866 347 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 HPRT1P00492 218 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 SAA4P35542 130 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
RFC1-211ENST00000509084 LIN54Q6MZP7 749 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 SPNS3Q6ZMD2 512 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 ZNF695Q8IW36 515 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 CIARTQ8N365 385 aaPredicted RBP8.41□□□□□ -1.06
RFC1-211ENST00000509084 OR5AN1Q8NGI8 311 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 NANPQ8TBE9 248 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 GLYATL2Q8WU03 294 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
RFC1-211ENST00000509084 C18orf12Q96KH6 178 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 TMEM56Q96MV1 263 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 AIFM2Q9BRQ8 373 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 MRPL20Q9BYC9 149 aaKnown RBP8.41□□□□□ -1.06
RFC1-211ENST00000509084 PLEKHA2Q9HB19 425 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 RAB18Q9NP72 206 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 TMEM56-RWDD3S4R434 201 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 ABCA12Q86UK0 2595 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
RFC1-211ENST00000509084 PDZD2O15018 2839 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 A0A1W2PPI3 338 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 FCGR3BO75015 233 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 CDS2O95674 445 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 IFNA21P01568 189 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 CT45A6P0DMU7 189 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 CT45A5P0DMU8 189 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 CT45A7P0DMV0 189 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 REG1BP48304 166 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 BCAP31P51572 246 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 ERVK-16P61578 105 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 PRB3Q04118 309 aaPredicted RBP8.4□□□□□ -1.06
RFC1-211ENST00000509084 HABP2Q14520 560 aaPredicted RBP8.4□□□□□ -1.06
RFC1-211ENST00000509084 ANKRD55Q3KP44 614 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 SP6Q3SY56 376 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 TMEM268Q5VZI3 342 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 FAM219AQ8IW50 185 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 PDZD9Q8IXQ8 264 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 UXS1Q8NBZ7 420 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 OSR1Q8TAX0 266 aaPredicted RBP8.4□□□□□ -1.06
RFC1-211ENST00000509084 CHAC2Q8WUX2 184 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 ASB13Q8WXK3 278 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 GPHA2Q96T91 129 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 SPIN2AQ99865 258 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 SPIN2BQ9BPZ2 258 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 WASHC3Q9Y3C0 194 aa8.4□□□□□ -1.06
RFC1-211ENST00000509084 TMED3Q9Y3Q3 217 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms