RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 RNASE10Q5GAN6 216 aaKnown RBP13.91□□□□□ -0.18
ERCC3-207ENST00000490062 C11orf88Q6PI97 169 aa13.91□□□□□ -0.18
ERCC3-207ENST00000490062 PDPNQ86YL7 162 aa13.91□□□□□ -0.18
ERCC3-207ENST00000490062 TRIM63Q969Q1 353 aa13.91□□□□□ -0.18
ERCC3-207ENST00000490062 ZNF2Q9BSG1 426 aaPredicted RBP13.91□□□□□ -0.18
ERCC3-207ENST00000490062 PLSCR3Q9NRY6 295 aa13.91□□□□□ -0.18
ERCC3-207ENST00000490062 WASHC3Q9Y3C0 194 aa13.91□□□□□ -0.18
ERCC3-207ENST00000490062 ANKRD20A5PA0PJZ0 165 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 UCP3P55916 312 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 HES1Q14469 280 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 ZNF66Q6ZN08 573 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 LHFPL1Q86WI0 220 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 OR4C13Q8NGP0 309 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 HSD17B10Q99714 261 aaKnown RBP13.9□□□□□ -0.18
ERCC3-207ENST00000490062 SRRQ9GZT4 340 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 PTTG2Q9NZH5 202 aa13.9□□□□□ -0.18
ERCC3-207ENST00000490062 NDUFA3O95167 84 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 APOA2P02652 100 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 RRASP10301 218 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 HERV-K104P61576 105 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 ZNF45Q02386 682 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 MEF2DQ14814 521 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
ERCC3-207ENST00000490062 STEAP1BQ6NZ63 245 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 TMEM17Q86X19 198 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 FAM71E2Q8N5Q1 922 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 C5orf56Q8N8D9 126 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 GDPD1Q8N9F7 314 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 BVESQ8NE79 360 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 NPBQ8NG41 125 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 LINC01006Q8NI28 216 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
ERCC3-207ENST00000490062 PRSS22Q9GZN4 317 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
ERCC3-207ENST00000490062 CLPSL1A2RUU4 121 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 RAB3DO95716 219 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 ZNF735P0CB33 412 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 GNRHRP30968 328 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 AADACL3Q5VUY0 350 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 LPCAT3Q6P1A2 487 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 Q8N402 240 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 Q8N9W7 124 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 DRAXINQ8NBI3 349 aaPredicted RBP13.88□□□□□ -0.19
ERCC3-207ENST00000490062 SECTM1Q8WVN6 248 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 TINAGL1Q9GZM7 467 aaPredicted RBP13.88□□□□□ -0.19
ERCC3-207ENST00000490062 SLC5A7Q9GZV3 580 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 FXYD6Q9H0Q3 95 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 BEX1Q9HBH7 125 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 CCL28Q9NRJ3 127 aa13.88□□□□□ -0.19
ERCC3-207ENST00000490062 LIN7CQ9NUP9 197 aaKnown RBP13.88□□□□□ -0.19
ERCC3-207ENST00000490062 LINC00473A8K010 186 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 M0QYG6 137 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 SPDEFO95238 335 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 IFNA6P05013 189 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 AKAIN1P0CW23 69 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 TSPAN5P62079 268 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 PYDC2Q56P42 97 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 AWAT1Q58HT5 328 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 GLDNQ6ZMI3 551 aaPredicted RBP13.87□□□□□ -0.19
ERCC3-207ENST00000490062 SLC35D1Q9NTN3 355 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 SLC2A8Q9NY64 477 aa13.87□□□□□ -0.19
ERCC3-207ENST00000490062 J3QRK9 145 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 IGKV1-16P04430 117 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 LGALS7P47929 136 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 PROK1P58294 105 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 LINC00205P59089 165 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 FXYD4P59646 89 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 BLCAPP62952 87 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 KLF9Q13886 244 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-207ENST00000490062 HNF4GQ14541 408 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 ZNF818PQ6ZRF7 136 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 MFSD4AQ8N468 514 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 OR4D10Q8NGI6 311 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 TERB2Q8NHR7 220 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 SPATA3Q8NHX4 192 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 RSRP1Q9BUV0 290 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 AKIP1Q9NQ31 210 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
ERCC3-207ENST00000490062 NBR2O15453 112 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 RBFOX2O43251 390 aaKnown RBP eCLIP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 MDKP21741 143 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 ECI1P42126 302 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 F2RL1P55085 397 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 AP3S2P59780 193 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 RPL30P62888 115 aaKnown RBP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 MMDQ15546 238 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 RTL8BQ17RB0 113 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 KCTD9Q7L273 389 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 SLC38A6Q8IZM9 456 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 OR4C16Q8NGL9 310 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 OR2T6Q8NHC8 308 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 OSR1Q8TAX0 266 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 FLYWCH2Q96CP2 140 aaKnown RBP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 ZNF486Q96H40 463 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 RITA1Q96K30 269 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 SDHCQ99643 169 aaPredicted RBP13.85□□□□□ -0.19
ERCC3-207ENST00000490062 SERTAD4Q9NUC0 356 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 ZNF580Q9UK33 172 aa13.85□□□□□ -0.19
ERCC3-207ENST00000490062 DISC1C4P0D8 188 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms