RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ACOT13Q9NPJ3 140 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 ZNF355PQ9NSJ1 428 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 SLC35D1Q9NTN3 355 aa13.43□□□□□ -0.26
ECHDC1-216ENST00000479525 RYR3Q15413 4870 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 IGKV1D-8A0A087WSZ0 117 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 LINC01619G3V211 115 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 ITGB1BP1O14713 200 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 LGALS1P09382 135 aaKnown RBP13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 PSMA1P25786 263 aaKnown RBP13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 MC5RP33032 325 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 SSBP2P81877 361 aaPredicted RBP13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 RUNX1Q01196 453 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 TBCEQ15813 527 aaPredicted RBP13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 C22orf42Q6IC83 251 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 ZNF367Q7RTV3 350 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 OVCH2Q7RTZ1 564 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 OR5T1Q8NG75 326 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 CHCHD6Q9BRQ6 235 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 SDHAF2Q9NX18 166 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 RAB22AQ9UL26 194 aa13.42□□□□□ -0.26
ECHDC1-216ENST00000479525 APOA2P02652 100 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 SPNP16150 400 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 CRIP2P52943 208 aaPredicted RBP13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 MRPS15P82914 257 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 FXYD3Q14802 87 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 BVESQ8NE79 360 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 OR10R2Q8NGX6 335 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 PTX4Q96A99 478 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 WWC2-AS2Q96NR7 200 aa13.41□□□□□ -0.26
ECHDC1-216ENST00000479525 MFNGO00587 321 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 IGLV2-23P01705 113 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 TRGV3P03979 118 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 MYL9P24844 172 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 OR4A4PQ8NGN8 299 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.4□□□□□ -0.265e-12■■■■■ 43.9
ECHDC1-216ENST00000479525 ADAM30Q9UKF2 790 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 MGAT4AQ9UM21 535 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 U3KQK5 164 aa13.4□□□□□ -0.26
ECHDC1-216ENST00000479525 ANKRD34BA5PLL1 514 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 IFITM5A6NNB3 132 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 RAB27BO00194 218 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 RBBP9O75884 186 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 RAB3BP20337 219 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 SRSF7Q16629 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 PDPNQ86YL7 162 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 TSNAXQ99598 290 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 CABLES2Q9BTV7 478 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 NDUFB11Q9NX14 153 aa13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 ZMAT5Q9UDW3 170 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 RBM7Q9Y580 266 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-216ENST00000479525 TRIM64CA6NLI5 447 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 CNIH1O95406 144 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 HIST1H1DP16402 221 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 TMEM267Q0VDI3 215 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 ARFRP1Q13795 201 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 OR10J5Q8NHC4 309 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 HARBI1Q96MB7 349 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 ATG5Q9H1Y0 275 aa13.38□□□□□ -0.27
ECHDC1-216ENST00000479525 TRBV6-7A0A0A0MS04 114 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 PDCD5O14737 125 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 PSMB9P28065 219 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 AKIRIN2Q53H80 203 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 OR2B11Q5JQS5 317 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 RHOVQ96L33 236 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 GINS4Q9BRT9 223 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 RSRP1Q9BUV0 290 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 VCX3BQ9H321 246 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 TNCP24821 2201 aa13.37□□□□□ -0.27
ECHDC1-216ENST00000479525 TRAV1-2A0A0B4J238 106 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 TRDV1A0A1B0GX56 115 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 LINC00473A8K010 186 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 SHOXO15266 292 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 RBMXL2O75526 392 aaKnown RBP13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 HSPB1P04792 205 aaKnown RBP13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 CRYGBP07316 175 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 GADD45AP24522 165 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 PITPNAQ00169 270 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 DCTN2Q13561 401 aaKnown RBP13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 ZNF429Q86V71 674 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 SBSPONQ8IVN8 264 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 RNF167Q9H6Y7 350 aa13.36□□□□□ -0.27
ECHDC1-216ENST00000479525 SPDEFO95238 335 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 CRYZL1O95825 349 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 TRBV12-3P01733 135 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 GP9P14770 177 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 TALDO1P37837 337 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 TCTEX1D1Q8N7M0 179 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 POC5Q8NA72 575 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 RNF5Q99942 180 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 ST6GALNAC5Q9BVH7 336 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 GHITMQ9H3K2 345 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms