RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CALRP27797 417 aaKnown RBP10.72□□□□□ -0.69
CCDC78-209ENST00000474647 VEGFCP49767 419 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 HMGN3Q15651 99 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 C22orf42Q6IC83 251 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 FAM71F2Q6NXP2 309 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 GRPEL2Q8TAA5 225 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 CENPOQ9BU64 300 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 CHMP1AQ9HD42 196 aaPredicted RBP10.72□□□□□ -0.69
CCDC78-209ENST00000474647 WASHC3Q9Y3C0 194 aa10.72□□□□□ -0.69
CCDC78-209ENST00000474647 C13orf42A0A1B0GVH6 325 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 ANKRD34BA5PLL1 514 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 H0YJW9 148 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 ARPC1BO15143 372 aaKnown RBP10.71□□□□□ -0.69
CCDC78-209ENST00000474647 CT45A6P0DMU7 189 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 CT45A5P0DMU8 189 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 CT45A7P0DMV0 189 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 MYL9P24844 172 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 HAGHQ16775 308 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 AKIRIN2Q53H80 203 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 LY6G6FQ5SQ64 297 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 GPR107Q5VW38 600 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 LRRTM1Q86UE6 522 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 GTSCR1Q86UQ5 136 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 NKAIN3Q8N8D7 197 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 ABHD14BQ96IU4 210 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 RHOVQ96L33 236 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 NEDD4LQ96PU5 975 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 SULT4A1Q9BR01 284 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 NAA50Q9GZZ1 169 aaKnown RBP10.71□□□□□ -0.69
CCDC78-209ENST00000474647 TUBA4BQ9H853 241 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 SLC23A1Q9UHI7 598 aa10.71□□□□□ -0.69
CCDC78-209ENST00000474647 ALMS1Q8TCU4 4167 aa10.71□□□□□ -0.7
CCDC78-209ENST00000474647 TRAV1-2A0A0B4J238 106 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 SHISA3A0PJX4 238 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
CCDC78-209ENST00000474647 SRMP19623 302 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 ZP3P21754 424 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 MC5RP33032 325 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 CLVS1Q8IUQ0 354 aaPredicted RBP10.7□□□□□ -0.7
CCDC78-209ENST00000474647 BCL7BQ9BQE9 202 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 FAAP24Q9BTP7 215 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 PARP12Q9H0J9 701 aaKnown RBP10.7□□□□□ -0.7
CCDC78-209ENST00000474647 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
CCDC78-209ENST00000474647 RNF167Q9H6Y7 350 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 RANGRFQ9HD47 186 aaPredicted RBP10.7□□□□□ -0.7
CCDC78-209ENST00000474647 RETNQ9HD89 108 aa10.7□□□□□ -0.7
CCDC78-209ENST00000474647 PLECQ15149 4684 aaKnown RBP10.69□□□□□ -0.7
CCDC78-209ENST00000474647 SLC22A1O15245 554 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 RBBP9O75884 186 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 TGFBR1P36897 503 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 TMBIM6P55061 237 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 LSM3P62310 102 aaKnown RBP10.69□□□□□ -0.7
CCDC78-209ENST00000474647 DEFA5Q01523 94 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 PSG5Q15238 335 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 CTF1Q16619 201 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 OR10K2Q6IF99 312 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 C6orf201Q7Z4U5 140 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 CDH26Q8IXH8 852 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 DRAXINQ8NBI3 349 aaPredicted RBP10.69□□□□□ -0.7
CCDC78-209ENST00000474647 OR5T1Q8NG75 326 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 OR9G4Q8NGQ1 327 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 FAM110AQ9BQ89 295 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 CEPT1Q9Y6K0 416 aa10.69□□□□□ -0.7
CCDC78-209ENST00000474647 H0Y980 276 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 PDCD5O14737 125 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 SLC25A17O43808 307 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 CNIH1O95406 144 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 VBP1P61758 197 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 NCS1P62166 190 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 RPS16P62249 146 aaKnown RBP10.68□□□□□ -0.7
CCDC78-209ENST00000474647 FXYD3Q14802 87 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 ZNF562Q6V9R5 426 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 TPRA1Q86W33 373 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 POC5Q8NA72 575 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 TSNAXQ99598 290 aaKnown RBP10.68□□□□□ -0.7
CCDC78-209ENST00000474647 GFI1Q99684 422 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 UQCC2Q9BRT2 126 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 KCNK15Q9H427 330 aa10.68□□□□□ -0.7
CCDC78-209ENST00000474647 A0A0G2JLM5 398 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 SMIM31A0A1B0GVY4 71 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 NOL3O60936 208 aaKnown RBP10.67□□□□□ -0.7
CCDC78-209ENST00000474647 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 CD37P11049 281 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 RAB3BP20337 219 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 SDC2P34741 201 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 GLT8D1Q68CQ7 371 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 LCN12Q6JVE5 192 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 OR5AN1Q8NGI8 311 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 RNF5Q99942 180 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 NICN1Q9BSH3 213 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 TMEM59Q9BXS4 323 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 PLEKHA3Q9HB20 300 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 OR1A1Q9P1Q5 309 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 GHRLQ9UBU3 117 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 ADAM30Q9UKF2 790 aa10.67□□□□□ -0.7
CCDC78-209ENST00000474647 ZNF701M0R085 212 aaPredicted RBP10.66□□□□□ -0.7
CCDC78-209ENST00000474647 SPDEFO95238 335 aa10.66□□□□□ -0.7
CCDC78-209ENST00000474647 APOA2P02652 100 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms