RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 HSPB11Q9Y547 144 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 NAV3Q8IVL0 2385 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 FXYD6-FXYD2A0A087WZ82 144 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 RNF222A6NCQ9 220 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 FAM157AC9JC47 383 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 RAB29O14966 203 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 ARPC5O15511 151 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 PITX3O75364 302 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 IGLV1-47P01700 117 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 SERPINE2P07093 398 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 CT45A6P0DMU7 189 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 CT45A5P0DMU8 189 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 CT45A7P0DMV0 189 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 PAX1P15863 534 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 VDAC1P21796 283 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 PSMB6P28072 239 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 REG1BP48304 166 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 RAB7AP51149 207 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 ARF6P62330 175 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 LCN2P80188 198 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 ZNF816Q0VGE8 651 aaPredicted RBP6.78□□□□□ -1.32
GTF3A-206ENST00000470606 CXorf66Q5JRM2 361 aaPredicted RBP6.78□□□□□ -1.32
GTF3A-206ENST00000470606 C11orf87Q6NUJ2 197 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 ZNF66Q6ZN08 573 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 SPAG16Q8N0X2 631 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 ABHD12Q8N2K0 398 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 OR4D5Q8NGN0 318 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 TCTEX1D2Q8WW35 142 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 ASB13Q8WXK3 278 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 TNFRSF14Q92956 283 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 IL22RA2Q969J5 263 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 HSD17B10Q99714 261 aaKnown RBP6.78□□□□□ -1.32
GTF3A-206ENST00000470606 TMED3Q9Y3Q3 217 aa6.78□□□□□ -1.32
GTF3A-206ENST00000470606 CR1P17927 2039 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 LOC105371242A0A075B767 164 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 IGHV2-26A0A0B4J1V2 119 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 MSGN1A6NI15 193 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 HMSDA8MTL9 139 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 NXPH3O95157 252 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 TMEM50AO95807 157 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 IGKV1-16P04430 117 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 LIPFP07098 398 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 SLC25A4P12235 298 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 LYL1P12980 280 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 G6PCP35575 357 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 PDLIM4P50479 330 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 SRPXP78539 464 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 TMEM30BQ3MIR4 351 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 ESCO2Q56NI9 601 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 ZNF833PQ6ZTB9 187 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 FOXRED2Q8IWF2 684 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 VKORC1L1Q8N0U8 176 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 OR1S1Q8NH92 325 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 FAM216AQ8WUB2 273 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 FAM168AQ92567 244 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 MRPL20Q9BYC9 149 aaKnown RBP6.77□□□□□ -1.33
GTF3A-206ENST00000470606 C11orf1Q9H5F2 150 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 RAB9BQ9NP90 201 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 SIRT7Q9NRC8 400 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 LIN7CQ9NUP9 197 aaKnown RBP6.77□□□□□ -1.33
GTF3A-206ENST00000470606 TNFSF18Q9UNG2 199 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 RCL1Q9Y2P8 373 aaKnown RBP6.77□□□□□ -1.33
GTF3A-206ENST00000470606 SESN1Q9Y6P5 492 aa6.77□□□□□ -1.33
GTF3A-206ENST00000470606 MYO9AB2RTY4 2548 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 FCGR3BO75015 233 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 KRASP01116 189 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 IFNA21P01568 189 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 EPHA1P21709 976 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 PAX6P26367 422 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 S100GP29377 79 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 KLRD1Q13241 179 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 TMEM65Q6PI78 240 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 LINC00311Q8N616 119 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 C8orf31Q8N9H6 132 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.76□□□□□ -1.33
GTF3A-206ENST00000470606 DMBX1Q8NFW5 382 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 OR9G1Q8NH87 305 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 GSX2Q9BZM3 304 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 ONECUT1Q9UBC0 465 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 A0A096LNT2 108 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 SRRM4A7MD48 611 aaKnown RBP6.76□□□□□ -1.33
GTF3A-206ENST00000470606 RNF212BA8MTL3 300 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 A8MXK9 166 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 K7EPK0 472 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 B3GALNT1O75752 331 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 COX7A1P24310 79 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 ZNF137PP52743 207 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 CYCSP99999 105 aaKnown RBP6.76□□□□□ -1.33
GTF3A-206ENST00000470606 MIDNQ504T8 468 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 ZNF546Q86UE3 836 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 PNKDQ8N490 385 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 FAM71E2Q8N5Q1 922 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 OR4P4Q8NGL7 312 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 MARVELD3Q96A59 401 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 RITA1Q96K30 269 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 MAGT1Q9H0U3 335 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 CACNG5Q9UF02 275 aa6.76□□□□□ -1.33
GTF3A-206ENST00000470606 SONP18583 2426 aaKnown RBP6.75□□□□□ -1.33
GTF3A-206ENST00000470606 TRAV3A0A0B4J244 114 aa6.75□□□□□ -1.33
GTF3A-206ENST00000470606 DUXBA0A1W2PPF3 345 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms