RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PDPNQ86YL7 162 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 OR10R2Q8NGX6 335 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 OR10J5Q8NHC4 309 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 GRPEL2Q8TAA5 225 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 OR2D2Q9H210 308 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.88■□□□□ 0.29
TTC28-204ENST00000468807 SLC35D1Q9NTN3 355 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 NDUFB11Q9NX14 153 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 ZNF256Q9Y2P7 627 aaPredicted RBP16.88■□□□□ 0.29
TTC28-204ENST00000468807 KCNK7Q9Y2U2 307 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 NUBP2Q9Y5Y2 271 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 TENM3Q9P273 2699 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 A0A0B4J203 849 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 TRAV1-2A0A0B4J238 106 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 SHISA3A0PJX4 238 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 IFITM5A6NNB3 132 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 LINC01619G3V211 115 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 LGALS1P09382 135 aaKnown RBP16.87■□□□□ 0.29
TTC28-204ENST00000468807 GSTT2P0CG29 244 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 GSTT2BP0CG30 244 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 RAB3BP20337 219 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 TPPP2P59282 170 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 PYHIN1Q6K0P9 492 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 CD200R1LQ6Q8B3 271 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 ZNF562Q6V9R5 426 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 ARPC1AQ92747 370 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 FLYWCH2Q96CP2 140 aaKnown RBP16.87■□□□□ 0.29
TTC28-204ENST00000468807 TPSG1Q9NRR2 321 aa16.87■□□□□ 0.29
TTC28-204ENST00000468807 ZNF230Q9UIE0 474 aaPredicted RBP16.87■□□□□ 0.29
TTC28-204ENST00000468807 LSM4Q9Y4Z0 139 aaKnown RBP16.87■□□□□ 0.29
TTC28-204ENST00000468807 RBM7Q9Y580 266 aaKnown RBP16.87■□□□□ 0.29
TTC28-204ENST00000468807 NBEAL2Q6ZNJ1 2754 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 SAP30O75446 220 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 SPDEFO95238 335 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 TALDO1P37837 337 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 INSL3P51460 131 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 ARFRP1Q13795 201 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 AKIRIN2Q53H80 203 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 C22orf42Q6IC83 251 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 DLX4Q92988 240 aaPredicted RBP16.86■□□□□ 0.29
TTC28-204ENST00000468807 GINS4Q9BRT9 223 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 TOLLIPQ9H0E2 274 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 ZNF355PQ9NSJ1 428 aa16.86■□□□□ 0.29
TTC28-204ENST00000468807 SORL1Q92673 2214 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 IGHV4OR15-8A0A075B7B6 117 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 A0A087WW49 117 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 SMIM30A4D0T7 59 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 CNIH1O95406 144 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 FXYD3Q14802 87 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 ZNF429Q86V71 674 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.85■□□□□ 0.29
TTC28-204ENST00000468807 ASCL2Q99929 193 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 RAB26Q9ULW5 256 aa16.85■□□□□ 0.29
TTC28-204ENST00000468807 TRDV1A0A1B0GX56 115 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 METTL21EPA6NDL7 271 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 MFNGO00587 321 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 HIST1H1DP16402 221 aaKnown RBP16.84■□□□□ 0.29
TTC28-204ENST00000468807 RAB6AP20340 208 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 CBX3Q13185 183 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 WWC2-AS2Q96NR7 200 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 CABLES2Q9BTV7 478 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 ATG5Q9H1Y0 275 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 SDHAF2Q9NX18 166 aa16.84■□□□□ 0.29
TTC28-204ENST00000468807 TRBV6-7A0A0A0MS04 114 aa16.83■□□□□ 0.28
TTC28-204ENST00000468807 RAB27BO00194 218 aa16.83■□□□□ 0.28
TTC28-204ENST00000468807 TRGV3P03979 118 aa16.83■□□□□ 0.28
TTC28-204ENST00000468807 NHLRC4P0CG21 123 aaPredicted RBP16.83■□□□□ 0.28
TTC28-204ENST00000468807 HARBI1Q96MB7 349 aa16.83■□□□□ 0.28
TTC28-204ENST00000468807 SLA2Q9H6Q3 261 aa16.83■□□□□ 0.28
TTC28-204ENST00000468807 ARPC1BO15143 372 aaKnown RBP16.82■□□□□ 0.28
TTC28-204ENST00000468807 PSMB9P28065 219 aa16.82■□□□□ 0.28
TTC28-204ENST00000468807 GABARAPL2P60520 117 aa16.82■□□□□ 0.28
TTC28-204ENST00000468807 BVESQ8NE79 360 aa16.82■□□□□ 0.28
TTC28-204ENST00000468807 OR5T1Q8NG75 326 aa16.82■□□□□ 0.28
TTC28-204ENST00000468807 SHOXO15266 292 aa16.81■□□□□ 0.28
TTC28-204ENST00000468807 HSPB1P04792 205 aaKnown RBP16.81■□□□□ 0.28
TTC28-204ENST00000468807 PITPNAQ00169 270 aa16.81■□□□□ 0.28
TTC28-204ENST00000468807 PJVKQ0ZLH3 352 aa16.81■□□□□ 0.28
TTC28-204ENST00000468807 RTL8BQ17RB0 113 aa16.81■□□□□ 0.28
TTC28-204ENST00000468807 U3KQK5 164 aa16.81■□□□□ 0.28
TTC28-204ENST00000468807 J3QRK9 145 aa16.8■□□□□ 0.28
TTC28-204ENST00000468807 LGALS7P47929 136 aa16.8■□□□□ 0.28
TTC28-204ENST00000468807 NR2C2APQ86WQ0 139 aa16.8■□□□□ 0.28
TTC28-204ENST00000468807 POC5Q8NA72 575 aa16.8■□□□□ 0.28
TTC28-204ENST00000468807 C5orf30Q96GV9 206 aa16.8■□□□□ 0.28
TTC28-204ENST00000468807 ELF5Q9UKW6 265 aaPredicted RBP16.8■□□□□ 0.28
TTC28-204ENST00000468807 SMAD5-AS1Q9Y6J3 95 aa16.8■□□□□ 0.28
TTC28-204ENST00000468807 C13orf42A0A1B0GVH6 325 aa16.79■□□□□ 0.28
TTC28-204ENST00000468807 IGLV2-23P01705 113 aa16.79■□□□□ 0.28
TTC28-204ENST00000468807 GALP22466 123 aa16.79■□□□□ 0.28
TTC28-204ENST00000468807 RHOVQ96L33 236 aa16.79■□□□□ 0.28
TTC28-204ENST00000468807 OR4C12Q96R67 309 aa16.79■□□□□ 0.28
TTC28-204ENST00000468807 PHB2Q99623 299 aa16.79■□□□□ 0.28
TTC28-204ENST00000468807 TXNL4BQ9NX01 149 aaKnown RBP16.79■□□□□ 0.28
TTC28-204ENST00000468807 HUWE1Q7Z6Z7 4374 aaKnown RBP16.78■□□□□ 0.28
TTC28-204ENST00000468807 IGKV1D-8A0A087WSZ0 117 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 MRPS14O60783 128 aaKnown RBP16.78■□□□□ 0.28
TTC28-204ENST00000468807 DIRAS3O95661 229 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 ATP6V1G2O95670 118 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 SPNP16150 400 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms