RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 IFNA6P05013 189 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 IL7P13232 177 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 PPP5CP53041 499 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 UCP3P55916 312 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 RPL30P62888 115 aaKnown RBP9□□□□□ -0.97
SSBP1-202ENST00000461433 TOMM5Q8N4H5 51 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 BVESQ8NE79 360 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 TERB2Q8NHR7 220 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 ZFAND2BQ8WV99 257 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 RBM14Q96PK6 669 aaKnown RBP9□□□□□ -0.97
SSBP1-202ENST00000461433 HRASLSQ9HDD0 168 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 PLSCR3Q9NRY6 295 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 MOSP00540 346 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 AMY1AP04745 511 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 MC5RP33032 325 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 THBS3P49746 956 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 BRWD1-AS2P59051 145 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 RELBQ01201 579 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 HNF4GQ14541 408 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 LIAT1Q6ZQX7 453 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 ZBTB34Q8NCN2 500 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 OR51S1Q8NGJ8 323 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 OR13C8Q8NGS7 320 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 OR2T10Q8NGZ9 312 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 AKR1E2Q96JD6 320 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 RSRP1Q9BUV0 290 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 SLC2A8Q9NY64 477 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 PITPNC1Q9UKF7 332 aa9□□□□□ -0.97
SSBP1-202ENST00000461433 DISC1C4P0D8 188 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 TNFSF12O43508 249 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 OR2F2O95006 317 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 IGKV1-16P04430 117 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 TMEM11P17152 192 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 CD40LGP29965 261 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 F2RL1P55085 397 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 AP3S2P59780 193 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 HES1Q14469 280 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 SCGB2B2Q4G0G5 96 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 DEDD2Q8WXF8 326 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 HSD17B10Q99714 261 aaKnown RBP8.99□□□□□ -0.97
SSBP1-202ENST00000461433 SLC25A33Q9BSK2 321 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 WASHC3Q9Y3C0 194 aa8.99□□□□□ -0.97
SSBP1-202ENST00000461433 PGLYRP1O75594 196 aaPredicted RBP8.98□□□□□ -0.97
SSBP1-202ENST00000461433 CNTFRP26992 372 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 RPL15P61313 204 aaKnown RBP8.98□□□□□ -0.97
SSBP1-202ENST00000461433 ZNF846Q147U1 533 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 TRIQKQ629K1 86 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 ZNF57Q68EA5 555 aaPredicted RBP8.98□□□□□ -0.97
SSBP1-202ENST00000461433 ZNF66Q6ZN08 573 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 Q6ZS46 218 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 C16orf82Q7Z2V1 217 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 PDPNQ86YL7 162 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.98□□□□□ -0.97
SSBP1-202ENST00000461433 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 PRRT1Q99946 306 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 CCDC32Q9BV29 185 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 C1RLQ9NZP8 487 aa8.98□□□□□ -0.97
SSBP1-202ENST00000461433 GPR31O00270 319 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 PLA2G10O15496 165 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 PI3P19957 117 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 BLCAPP62952 87 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 TAGLNQ01995 201 aaKnown RBP8.97□□□□□ -0.97
SSBP1-202ENST00000461433 LPCAT3Q6P1A2 487 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 IDO2Q6ZQW0 420 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 KCTD9Q7L273 389 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 SLC38A6Q8IZM9 456 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 Q8N9W7 124 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 MARCH1Q8TCQ1 289 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 WDR12Q9GZL7 423 aaKnown RBP8.97□□□□□ -0.97
SSBP1-202ENST00000461433 RAB18Q9NP72 206 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 SLC35D1Q9NTN3 355 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 MCUBQ9NWR8 336 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 H7C2Y5 167 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 APOA2P02652 100 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 FAUP35544 74 aaKnown RBP8.97□□□□□ -0.97
SSBP1-202ENST00000461433 IFITM3Q01628 133 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 PHLDA2Q53GA4 152 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 TMEM177Q53S58 311 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 DHRS7BQ6IAN0 325 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-202ENST00000461433 C11orf88Q6PI97 169 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 Q6ZSV7 163 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 FAM71E2Q8N5Q1 922 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 C5orf56Q8N8D9 126 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 NPBQ8NG41 125 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 BORCS5Q969J3 196 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 RTBDNQ9BSG5 229 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-202ENST00000461433 SLC2A9Q9NRM0 540 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 SCP2D1Q9UJQ7 156 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 GPR132Q9UNW8 380 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 MOB4Q9Y3A3 225 aa8.97□□□□□ -0.97
SSBP1-202ENST00000461433 LINC00854A0A1B0GVQ3 168 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 SRRM4A7MD48 611 aaKnown RBP8.96□□□□□ -0.98
SSBP1-202ENST00000461433 FGF16O43320 207 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 RAMP3O60896 148 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 FCGR3BO75015 233 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 TSPAN9O75954 239 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 NDUFA3O95167 84 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 IGLV2-23P01705 113 aa8.96□□□□□ -0.98
SSBP1-202ENST00000461433 RLN1P04808 185 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms