RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 SSX7Q7RTT5 188 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 CPNE9Q8IYJ1 553 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 BOD1L2Q8IYS8 172 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 MUC15Q8N387 334 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 EIF4E3Q8N5X7 224 aaKnown RBP1.31□□□□□ -2.2
PTPN12-207ENST00000440186 BPIFB6Q8NFQ5 453 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 DYNC2LI1Q8TCX1 351 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 APOBEC3DQ96AK3 386 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-207ENST00000440186 CLDN23Q96B33 292 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 FAM210AQ96ND0 272 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 MED10Q9BTT4 135 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 ABCG5Q9H222 651 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 CD300AQ9UGN4 299 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 FBXL3Q9UKT7 428 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 CNOT1A5YKK6 2376 aaKnown RBP1.31□□□□□ -2.2
PTPN12-207ENST00000440186 ACACBO00763 2458 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 PCNX2A6NKB5 2137 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-207ENST00000440186 COL5A1P20908 1838 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-207ENST00000440186 LAMA4Q16363 1823 aa1.31□□□□□ -2.2
PTPN12-207ENST00000440186 DOCK6Q96HP0 2047 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 EPG5Q9HCE0 2579 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 KNTC1P50748 2209 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 IGKV3D-11A0A0A0MRZ8 115 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 EFCAB9A8MZ26 197 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 GGTLC3B5MD39 225 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 SYNGR1O43759 233 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 UGT2B11O75310 529 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 GPR75O95800 540 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 IGKV4-1P06312 121 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 SMIM10L2AP0DMW4 78 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 SMIM10L2BP0DMW5 78 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 HOXA6P31267 233 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 HSPA13P48723 471 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 INPP1P49441 399 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 MP68P56378 58 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 RAB2AP61019 212 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 DEFB103AP81534 67 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 SKP2Q13309 424 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 ZNF141Q15928 474 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 BCL2A1Q16548 175 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 PYDC2Q56P42 97 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 BRD3OSQ6XYD6 125 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 DEFB128Q7Z7B8 93 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 KRTCAP2Q8N6L1 136 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 FER1L6-AS1Q8NA97 138 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 DTD1Q8TEA8 209 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 KCTD4Q8WVF5 259 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 CMBLQ96DG6 245 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 IGF2BP2-AS1Q96M15 143 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 TMEM56Q96MV1 263 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 PKMYT1Q99640 499 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 SPZ1Q9BXG8 430 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 ASCL3Q9NQ33 180 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 COMMD9Q9P000 198 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 OR5V1Q9UGF6 321 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 ZNF230Q9UIE0 474 aaPredicted RBP1.3□□□□□ -2.2
PTPN12-207ENST00000440186 U3KQK5 164 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 CCDC171Q6TFL3 1326 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 FAM208BQ5VWN6 2430 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 C5orf42Q9H799 3197 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 TRPM6Q9BX84 2022 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 ATG2BQ96BY7 2078 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 KMT2BQ9UMN6 2715 aaPredicted RBP1.3□□□□□ -2.2
PTPN12-207ENST00000440186 SPAG17Q6Q759 2223 aa1.3□□□□□ -2.2
PTPN12-207ENST00000440186 VPS13AQ96RL7 3174 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 CHD8Q9HCK8 2581 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 PLXNA4Q9HCM2 1894 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 TRBV24-1A0A075B6N3 115 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 A0A1B0GU33 70 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 A6NED7 52 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 C9J4A7 227 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 D6RAR5 112 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 M0QZ92 97 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 PHYHO14832 338 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 CYTH3O43739 400 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 RAB36O95755 333 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 LTAP01374 205 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 GYPCP04921 128 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 ZNF708P17019 499 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 LGALS3P17931 250 aaKnown RBP1.29□□□□□ -2.2
PTPN12-207ENST00000440186 ATF1P18846 271 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 CRABP2P29373 138 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 STC1P52823 247 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 FAM3AP98173 230 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 DMTNQ08495 405 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 PAFAH1B3Q15102 231 aaKnown RBP1.29□□□□□ -2.2
PTPN12-207ENST00000440186 LGALSLQ3ZCW2 172 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-207ENST00000440186 TIMM23BQ5SRD1 257 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 HES3Q5TGS1 186 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 LYZL2Q7Z4W2 148 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 LYPD6Q86Y78 171 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 CRLF3Q8IUI8 442 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 Q8NAQ8 132 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 LY6G5BQ8NDX9 201 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 OR11G2Q8NGC1 345 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 OR4A5Q8NH83 315 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 OR5AK3PQ8NH89 298 aa1.29□□□□□ -2.2
PTPN12-207ENST00000440186 MUC7Q8TAX7 377 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms