RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GRPEL2Q8TAA5 225 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 ABHD5Q8WTS1 349 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 MS4A10Q96PG2 267 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 OR2D2Q9H210 308 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 SDHAF2Q9NX18 166 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 ADAM30Q9UKF2 790 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 ZNF256Q9Y2P7 627 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-202ENST00000430200 LRRC42Q9Y546 428 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 A0A075B6Q4 140 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 TRBV6-7A0A0A0MS04 114 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 IFITM5A6NNB3 132 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 OVOL1O14753 267 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 BET1O15155 118 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 FABP7O15540 132 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 RAMP3O60896 148 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 TFAP2AP05549 437 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 GSTP1P09211 210 aaKnown RBP9.06□□□□□ -0.96
HDAC4-202ENST00000430200 HIST1H1DP16402 221 aaKnown RBP9.06□□□□□ -0.96
HDAC4-202ENST00000430200 PSMA1P25786 263 aaKnown RBP9.06□□□□□ -0.96
HDAC4-202ENST00000430200 PLGLAQ15195 96 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 TRAM1Q15629 374 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 C22orf42Q6IC83 251 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 UNQ5815/PRO19632Q6UWF5 114 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 OR56B1Q8NGI3 324 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 RAB3CQ96E17 227 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 WWC2-AS2Q96NR7 200 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 CHCHD6Q9BRQ6 235 aa9.06□□□□□ -0.96
HDAC4-202ENST00000430200 RIMS4Q9H426 269 aaPredicted RBP9.06□□□□□ -0.96
HDAC4-202ENST00000430200 ERICH4A6NGS2 130 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 TRIM64CA6NLI5 447 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
HDAC4-202ENST00000430200 LINC00473A8K010 186 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 LINC01619G3V211 115 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 RBBP9O75884 186 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 SPDEFO95238 335 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 TRBV12-3P01733 135 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 OR8U9P0C7N5 309 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 SPNP16150 400 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 MC5RP33032 325 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 TPPP2P59282 170 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 ACTBL2Q562R1 376 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 PDPNQ86YL7 162 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 OR4A4PQ8NGN8 299 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 OR10R2Q8NGX6 335 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 DDB2Q92466 427 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 SLC35D1Q9NTN3 355 aa9.05□□□□□ -0.96
HDAC4-202ENST00000430200 TRAV1-2A0A0B4J238 106 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 SAP30O75446 220 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 LY86O95711 162 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 APELAP0DMC3 54 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 AKIRIN2Q53H80 203 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 ACSM6Q6P461 480 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 ZNF562Q6V9R5 426 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 IDO2Q6ZQW0 420 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 OVCH2Q7RTZ1 564 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 RHOVQ96L33 236 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 RAB22AQ9UL26 194 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 U3KQK5 164 aa9.04□□□□□ -0.96
HDAC4-202ENST00000430200 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 SSX5O60225 188 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 IGLV2-14P01704 120 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 APOA2P02652 100 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 TRGV3P03979 118 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 RAB3BP20337 219 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 RPS16P62249 146 aaKnown RBP9.03□□□□□ -0.96
HDAC4-202ENST00000430200 FXYD3Q14802 87 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 C10orf55Q5SWW7 151 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 UBE2UQ5VVX9 321 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 C19orf35Q6ZS72 473 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 SBSPONQ8IVN8 264 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 H1FOOQ8IZA3 346 aaPredicted RBP9.03□□□□□ -0.96
HDAC4-202ENST00000430200 TCTEX1D1Q8N7M0 179 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 POC5Q8NA72 575 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.03□□□□□ -0.96
HDAC4-202ENST00000430200 BVESQ8NE79 360 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 NUDCD2Q8WVJ2 157 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 HARBI1Q96MB7 349 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 TSNAXQ99598 290 aaKnown RBP9.03□□□□□ -0.96
HDAC4-202ENST00000430200 RNF167Q9H6Y7 350 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 ZNF221Q9UK13 617 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 MGAT4AQ9UM21 535 aa9.03□□□□□ -0.96
HDAC4-202ENST00000430200 IGKV1D-13A0A0B4J2D9 117 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 CLEC2LP0C7M8 214 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 IGKV1-13P0DP09 117 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 RAB6AP20340 208 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 DUTP33316 252 aaKnown RBP9.02□□□□□ -0.97
HDAC4-202ENST00000430200 GABARAPL2P60520 117 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 DYRK1AQ13627 763 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 TMEM177Q53S58 311 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 SPARTQ8N0X7 666 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 OR5T1Q8NG75 326 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 LGALS14Q8TCE9 139 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 FLYWCH2Q96CP2 140 aaKnown RBP9.02□□□□□ -0.97
HDAC4-202ENST00000430200 GPHA2Q96T91 129 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 RNF5Q99942 180 aa9.02□□□□□ -0.97
HDAC4-202ENST00000430200 TXNL4BQ9NX01 149 aaKnown RBP9.02□□□□□ -0.97
HDAC4-202ENST00000430200 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms